Part of scaffold_928 (Scaffold)

For more information consult the page for scaffold_928 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SAMSN1 ENSTTRG00000007413 (Bottlenosed dolphin)

Gene Details

SAM domain, SH3 domain and nuclear localization signals 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007014, Bottlenosed dolphin)

Protein Percentage 96.68%
cDNA percentage 97.34%
Ka/Ks Ratio 0.24227 (Ka = 0.0161, Ks = 0.0666)

SAMSN1 ENSBTAG00000002623 (Cow)

Gene Details

SAM domain-containing protein SAMSN-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003394, Cow)

Protein Percentage 87.67%
cDNA percentage 91.11%
Ka/Ks Ratio 0.42925 (Ka = 0.0739, Ks = 0.1721)

SAMSN1  (Minke Whale)

Gene Details

SAM domain, SH3 domain and nuclear localization signals 1

External Links

Gene match (Identifier: BACU000081, Minke Whale)

Protein Percentage 95.35%
cDNA percentage 96.12%
Ka/Ks Ratio 0.45011 (Ka = 0.0309, Ks = 0.0686)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 906 bp    Location:45259..32198   Strand:-
>bmy_13969
CGCAGCAGCAGTTTTGGGAATTTTGACCGTTTTCGGAATAATTCTGTATCAAAACCAGATGATTCAACTGGGGTACATGAAGGGGAACGCATAAATGAAAGTGGAGAACAAAACAAAACTTCAAATAATGGAGGAAGTTTAGGTAAAAAAATGAGAGCTATTTCCTGGACAATGAAGAAAAAAGTGGGTAAAAAGTATATCAAAGCCCTTTCTGAAGAAAACGATGGGGAAGATGGAGAGGATGCCCTCCCTTATCGGAACAGTGATCCCACGATTGGAACCCATACAGAGAAGAGCTCCCTCAAAGCCAGTGACTCCATGGACAGTCTCTACAGTGCGCGGAGCTCATCAAGTGGAATAACAAGCTGTTCAGACGGTACAAGTAACCGGGACAGCTTTCGACTCGATGATGATGGCCCCTACTCCGGACCATTCTGTGGCCGTGCCCGCGTACATACCAGTTTCACACCGAGCCCTTATGACACTGACTCCCTCAAAATCAAGAAAGGAGATATCATAGACATTATCTGCAAAACGCCAATGGGGATTTGGACAGGAATGTTAAACAATAAGGTGGGAAACTTCAAATTTATTTATGTGGATGTCATCTCAGAAGAAGAAGCAGCCCCCAAGAAAATAAAGGCACACAGAAGGAGTGGAAAGGAAAAACCGAAGACTCTGCAGGAGTTCTTAGAGAGGATTCACCTTCAGGAATACACCTCAACACTTTTGCTCAATGGTTACGAGACCCTAGAAGATTTAAAGGATATAAAAGAGAGTCATCTCATTGAATTAAACATTAAAAACCCAGAAGATAGGATGAGGTTACTATCAGCTGCTGAAAATCTTCTTGATGAAGAAAGTAAGTATGCACACCTACTCTTCTCCCTAGCTGAGAATCAGTAA

Related Sequences

bmy_13969T0 Protein

Length: 302 aa      View alignments
>bmy_13969T0
RSSSFGNFDRFRNNSVSKPDDSTGVHEGERINESGEQNKTSNNGGSLGKKMRAISWTMKKKVGKKYIKALSEENDGEDGEDALPYRNSDPTIGTHTEKSSLKASDSMDSLYSARSSSSGITSCSDGTSNRDSFRLDDDGPYSGPFCGRARVHTSFTPSPYDTDSLKIKKGDIIDIICKTPMGIWTGMLNNKVGNFKFIYVDVISEEEAAPKKIKAHRRSGKEKPKTLQEFLERIHLQEYTSTLLLNGYETLEDLKDIKESHLIELNIKNPEDRMRLLSAAENLLDEESKYAHLLFSLAENQ*