Sequence details bmy_13869 (Coding sequence)

Part of scaffold_923 (Scaffold)

For more information consult the page for scaffold_923 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GRIN1 ENSTTRG00000002098 (Bottlenosed dolphin)

Gene Details

glutamate receptor, ionotropic, N-methyl D-aspartate 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001972, Bottlenosed dolphin)

Protein Percentage 80.04%
cDNA percentage 81.35%
Ka/Ks Ratio 0.1786 (Ka = 0.0653, Ks = 0.3655)

GRIN1 ENSBTAG00000047202 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056506, Cow)

Protein Percentage 92.74%
cDNA percentage 90.12%
Ka/Ks Ratio 0.0555 (Ka = 0.0438, Ks = 0.7884)

GRIN1  (Minke Whale)

Gene Details

glutamate receptor, ionotropic, N-methyl D-aspartate 1

External Links

Gene match (Identifier: BACU009829, Minke Whale)

Protein Percentage 92.86%
cDNA percentage 93.71%
Ka/Ks Ratio 0.21232 (Ka = 0.0466, Ks = 0.2193)

Additional orthologs identified in other species via the OPTIC pipeline.

GRIN1 (Human)   Grin1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2715 bp    Location:9121..32007   Strand:+
Raw sequence 
>bmy_13869
ATGAGCACCATGCGCCTGCTGACACTCGCCCTGCTTTTCTCCTGCTCCTTCGCCCGTGCCGCCTGCGACCCCAAGATCGTCAACATCGGCGCGGTGCTGAGCACGCGGAAGCACGAGCAGATGTTCCGCGAGGCTGTGAACCAGGCCAACAAGCGGCATGGCTCCTGGAAGATCCAGCTCAACGCCACCTCCGTCACCCACAAGCCCAACGCCATCCAGATGGCCTTGTCGGTGTGCGAAGACCTCATCTCCAGCCAGGTCTACGCCATCCTAGTTAGCCACCCACCTACCCCCAACGACCACTTCACTCCCACCCCCGTCTCCTACACAGCYGGCTTCTACCGCATCCCCGTCCTGGGGCTGACCACCCGCATGTCCATCTACTCAGACAAGAGCATCCACCTGAGCTTCCTGCGCACCGTGCCGCCCTACTCCCACCAGTCGAGCGTCTGGTTCGAGATGATGCGCGTCTACAGCTGGAACCACATCATCCTCCTGGTCAGCGACGACCACGAGGGCCGGGCGGCGCAGAAGCGCCTGGAGACACTGCTGGAGGAGCGCGAGTCCAAGGCCGAGAAGGTGCTGCAGTTCGACCCGGGGACCAAGAACGTGACGGCCCTGCTGATGGAGGCGCGGGAGCTGGAGGCTCGGGTCATCGTCCTCTCTGCCAGCGAGGACGACGCTGCCACCGTGTACCGCGCAGCCGCAATGCTGAACATGACCGGCTCGGGGTACGTGTGGCTGGTGGGGGAGCGCGAGATCTCGGGGAACGCCCTGCGCTACGCCCCAGACGGCATCATCGGGCTGCAGCTCATCAACGGCAAGAACGAGTCGGCCCACATCAGCGATGCCGTCGGGGTGGTGGCCCAGGCCGTGCACGAGCTTCTCGAGAAGGAGAACATCACCGACCCGCCGCGGGGCTGCGTGGGCAACACCAACATCTGGAAGACCGGGCCGCTCTTCAAGAGAGTGCTCATGTCTTCCAAGTACGCAGACGGCGTGACCGGCCGCGTGGAATTCAACGAGGATGGGGACCGGAAGTTTGCCAACTACAGCATCATGAACCTGCAGAACCGCAAGCTGGTACAAGTGGGCATCTACAACGGCACCCATGTCATTCCCAACGACAGGAAAATCATCTGGCCAGGCGGAGAGACAGAGAAGCCCCGAGGTTACCAGATGTCCACCAGGCTGAAGATCGTGACGATCCACCAGGAGCCCTTCGTGTATGTCAAGCCCACGCTGAGCGACGGCACGTGCAAGGAGGAGTTCACCGTGAACGGGGATCCGGTGAAGAAGGTGATCTGCACCGGGCCCAACGACACGTCGCCGGGCAGCCCACGCCACACCGTGCCGCAGTGCTGCTATGGCTTCTGCATCGACCTACTCATCAAACTGGCGCGGACCATGAACTTCACTTACGAGGTGCACCTAGTGGCGGACGGCAAGTTCGGCACGCAGGAGCGGGTGAACAACAGCAATAAGAAGGAGTGGAACGGGATGATGGGCGAGCTGCTCAGCGGGCAGGCGGACATGATCGTGGCGCCGCTGACCATCAACAACGAGCGCGCACAGTACATCGAGTTCTCCAAGCCCTTCAAGTACCAGGGCCTGACCATCCTGGTCAAGAAGGAGATCCCCCGGAGCACGCTGGACTCGTTCATGCAGCCCTTCCAGAGCACGCTCTGGCTGCTGGTGGGGCTGTCAGTGCATGTGGTGGCCGTGATGCTGTACCTGCTGGACCGCTTCAGGAGCTTCTCGGCGCGCATCCTGGGCATGGTGTGGGCCGGCTTCGCCATGATCATCGTGGCCTCCTACACTGCCAACCTGGCGGCCTTCCTGGTGCTGGACCGGCCCGAGGAGCGCATCACCGGCATCAACGACCCCCGACTGAGGAATCCTTCGGACAAGTTCATCTACGCGACGGTGAAGCAGAGCTCCGTGGACATCTACTTCCGGCGGCAGGTGGAGCTGAGCACCATGTACCGGCACATGGAGAAGCACAACTACGAGAGCGCGGCCGAGGCCATCCAGGCCGTGCGGGACAACAAGCTGCATGCCTTCATCTGGGACTCGGCGGTGCTGGAGTTCGAGGCCTCGCAGAAGTGCGACCTGGTGACCACCGGCGAGCTGTTCTTCCGCTCAGGCTTTGGCATCGGCATGCGCAAGGACAGTCCCTGGAAGCAGAACGTCTCCCTGTCCATCCTCAAGTCCCACGAGAACGGCTTCATGGAAGACCTGGACAAGACGTGGGTGCGGTACCAGGAGTGTGATTCGCGCAGCAACGCCCCTGCTACCCTCACCTTCGAGAACATGGCAGGGGTCTTCATGCTGGTGGCCGGGGGCATCGTGGCTGGGATCTTCCTGATCTTCATCGAGATCGCCTACAAGCGGCACAAGGACGCTCGCCGGAAGCAGATGCAGCTGGCCTTCGCAGCGGTGAATGTGTGGAGAAAGAACCTGCAGGTAGGGCAGGCCACCCTCCGAGGCCTGGTGCCCACGGCCCGGCCTGGCCCCGGCCCTCCTCCATCCCCGCAGGCCGAAGCGCTGGCTCTGGCTCCCAGGAGCCCGCGTGGCAAGGACTGGAGCTGGGAGCCACAGCCAAGGCCGCGCTGCTGGGGGCCACCCGCAGGTGGCCGCCTCTGCAAAGCCGGGCTTCAAGCGTCCGCCTGGCCCCTCTGTCTCCAGAGTCGCCCACCGGCGCCCATTCCATAG

Related Sequences

bmy_13869T0 Protein

Length: 905 aa      View alignments
>bmy_13869T0
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDPGTKNVTALLMEARELEARVIVLSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQVGQATLRGLVPTARPGPGPPPSPQAEALALAPRSPRGKDWSWEPQPRPRCWGPPAGGRLCKAGLQASAWPLCLQSRPPAPIP*