Sequence details bmy_13800 (Coding sequence)

Part of scaffold_919 (Scaffold)

For more information consult the page for scaffold_919 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM65 ENSTTRG00000015894 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 65

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015060, Bottlenosed dolphin)

Protein Percentage 92.84%
cDNA percentage 95.64%
Ka/Ks Ratio 0.2631 (Ka = 0.0305, Ks = 0.1159)

TRIM65 ENSBTAG00000022006 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029353, Cow)

Protein Percentage 85.69%
cDNA percentage 90.25%
Ka/Ks Ratio 0.22051 (Ka = 0.0705, Ks = 0.3195)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIM65 (Human)   Trim65 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1470 bp    Location:572884..578608   Strand:+
Raw sequence 
>bmy_13800
ATGGCCTCGCAGAGTCTGGAGGACAGGCTGACCTGTGCCATCTGCCTGGGGCTCTACCAGGACCCGGTGACGCTGCTCTGCGGCCACAACTTCTGCTGGGCCTGTATCCGGGACTGGTGGGGCCGCTGTGAGAAGGTGTGCCCCGAGTGCCGGGCGCCCTTCCCCGACAACGCCGAGCTGCGCCGCAACGTGGCTCTGAGCGGCGTGCTGGAGGAGCTGCGCGCCCGGCCGGCGCCCGACCCCGGCCCCGGCGYRCGCTGCCCCCGGCACGGGAGGCCGCTCGAGCTTTTCTGCCGCACCGAGGGCCTCTGCGTGTGCAGCGTGTGCACCGTGCGCGAGTGTCGCCTCCACGAGCGGACGCTGCTGGACGCGGAGCGCCGGGAGCGCGAGGCCCAGCTGAGAGCCACACTGGAGGTCACCCAGCAGCAGGCCACCCAGGCTGAGAGCCAGCTACAGGAGCTGCAGCAGCGAAGCAGCCAGATCCAGAGCTCAGCCTGCACCCTGACCTCCGTGATCTCTGGCAAGTTCAGCCACCTGCTGCAGGCCCTGGAGATGCAGCGGGACTTGGCTCTGAGGGACATCGAGGTGGCCAAGACACAGGCGCTGGAACAGGCCCGGGACGAGAAACAGCGACTGCAGGGCCACCTGGAGGCTTTGTCTTGCTGTGACCACAGGATTCGCAACCTCCTGGAGCAATTGGATGACCGGACCTTCCTCCAGGAATCACAGCTCCTGGCGCCCCCAGGCCCTCTAGGGCCACTGACTCTTCCGCATTGGGACGAAGATCAGCAGCTTGGTGGCCTGAAGGAGTCACTGAGCCAGCTGTGTGCCCTCCTCCTGGAAGAGGGGGGCCACCCCGGAGCACCAGCTGAGGCTGCTGACTTGGGCTCCATGGATTATCGCAACCTGACCTTCGACCCCGTCAGCGCCAACCGTCACTTCTGCCTGTCTCAGCAGGACCAGCGGGTAAAGCACTGTCGCAAGCCCCAGGGCCCAGATGGGCCGGGCAGCTTCGAGCTCTGGCAGGTGCAGTGTGCCCAGAGCTTCCAGGCCGGGCGGCACTACTGGGAGGTGCGTGCGTCCAACCACTCGGTGACGCTGGGCGTCGCCTACTCGGAGCTGACGAGGCGCAAGCTGGGGCCCCACACGGACAACATCGGCCGCGGGCCCAGCTCCTGGGGGCTCTGCATTCAGGAGGACAGTGCCCAGGCCTGGCACAACGGGGAGGCCCGGCGCCTCCCAGGGGTATCAGGGCGGCTCCTGGGCATGGATTTGGACCTGACCTCTGGCTGCCTCACCTTCTACAGCCTGGAGCCCGAGACCCAACCCTTGTATACCTTCCATGCCATCTTCGCCCGGCCCCTCTACCCCGTATTCTGGCTCCTCGAGGGTAGGACCCTGACCCTGTGCCATCAGCCCGAGGCCAAGCTCCCTCCAGGGCTCCAGGAAGAGGCCTCAGGGCTCAGCTGA

Related Sequences

bmy_13800T0 Protein

Length: 490 aa      View alignments
>bmy_13800T0
MASQSLEDRLTCAICLGLYQDPVTLLCGHNFCWACIRDWWGRCEKVCPECRAPFPDNAELRRNVALSGVLEELRARPAPDPGPGXRCPRHGRPLELFCRTEGLCVCSVCTVRECRLHERTLLDAERREREAQLRATLEVTQQQATQAESQLQELQQRSSQIQSSACTLTSVISGKFSHLLQALEMQRDLALRDIEVAKTQALEQARDEKQRLQGHLEALSCCDHRIRNLLEQLDDRTFLQESQLLAPPGPLGPLTLPHWDEDQQLGGLKESLSQLCALLLEEGGHPGAPAEAADLGSMDYRNLTFDPVSANRHFCLSQQDQRVKHCRKPQGPDGPGSFELWQVQCAQSFQAGRHYWEVRASNHSVTLGVAYSELTRRKLGPHTDNIGRGPSSWGLCIQEDSAQAWHNGEARRLPGVSGRLLGMDLDLTSGCLTFYSLEPETQPLYTFHAIFARPLYPVFWLLEGRTLTLCHQPEAKLPPGLQEEASGLS*