Part of scaffold_919 (Scaffold)

For more information consult the page for scaffold_919 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZACN ENSTTRG00000015913 (Bottlenosed dolphin)

Gene Details

zinc activated ligand-gated ion channel

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015078, Bottlenosed dolphin)

Protein Percentage 88.35%
cDNA percentage 94.18%
Ka/Ks Ratio 0.755 (Ka = 0.058, Ks = 0.0768)

ZACN ENSBTAG00000007906 (Cow)

Gene Details

zinc-activated ligand-gated ion channel precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010396, Cow)

Protein Percentage 78.97%
cDNA percentage 84.76%
Ka/Ks Ratio 0.30956 (Ka = 0.1284, Ks = 0.4147)

ZACN  (Minke Whale)

Gene Details

zinc activated ligand-gated ion channel

External Links

Gene match (Identifier: BACU020379, Minke Whale)

Protein Percentage 89.06%
cDNA percentage 92.71%
Ka/Ks Ratio 0.49941 (Ka = 0.0647, Ks = 0.1295)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1389 bp    Location:426561..423163   Strand:-
>bmy_13788
ATGGCCCTGTGGCTCCTGCCCCATCTCACCTTCCTCAGGCTCGGAACCCCACAGCCCTTGGCTCGGGTGTGTGGCTTCAGCGTGCCAGCAGTTGACTGGCCATCCTTCTTCAACCTCAACTCACCCCAGGAGGTTCAGGAAACCATCCAGATTCCGAACAACGGAAGCGCACCCCTGCTCGTGGACATGCAGGTGTTTGTGTCAAACGTGTTTAACGTGGACATCCTGCGGTACACAGTGTCCTCCACGATGCTGCTTCGGCTGTCCTGGCTGGACACTCGCCTGGCCTTGAACTCGACTGGGCACCGGCAGGGCAGAGTCACGCTGCCCTGGGACTCTCTCTGGACACCAGGACTCACTATCCGGGAGGCGCTCTGGGTGAGCTGGCAGGACCAGAGCCCACAGGCCCGAGTGGACCGGGATGGCCACATCGAGCTCTACCTGGCCCTCACCACGGAGACCTACTGTGACTTTGAGCTTTTCCACTTCCCCAGGGACCAGAGCGACTGCAGCCTCAGCTTCTTCGCTTTTGGCAACACTGTGATGGAGCTGGAGTTCCAGGCCCATGCGGTGAATGAGATCGTGAGTGTCAAGAGGGAATACGTAGTTCAGGATTTGAAAACCCAAGTCCCATCCCAGCAGCTGGTGCCCTGCTTCCAGGCGACGTTGCGCCCGCAGAACACAGCGCTAAAGGCCATCATAGCGCTCTTGGTACCCGGGGAGGCGCTGCCGTTGGCTGACCCGTGCGGGCCGCTGCTGCCCCTCCGGACGGAGCACATCGCCTACAAGGTGACCCTGCTGCTGGGCTACCTCGTCTTCCACTCCTCCCTGGTTCAGGCCCTGCCCAGCTCCTCCTCCTGCAAGCCGCTGCTCAGTAAGGCCCACACCCTCGCCTGGCCGGGGGCAGGACCACCTTGTGCTGGGCCCACCTCATTCTGCCCGCACCTGCTGTCGCCCAAGCCGGGGCGCCTCTGCTCAGGTGCCTGGGCTCTCAAGGCTGGACCTGGCCCCTGCCCTCCCCTCCCTGCCCACCTCCCCAGTTCACTACTTCACTGTCCTATGCTGCTCTTCATCAGCACCACGGAGACCGTGCTGTTGTCCGGGCTGCTGGCCCACAGCAACCTCAGGGCGGAGAGCAGCCCCAGCCCAGTCCTGAGAGGGGAGCAGCACGACTGTGGAAGCCCAGGGCCTGATCCTGAGGAAGCCTCCAGAGGAGTAAAGGGGTCCAGGAGRAGCTGGCCTGAGGCTGCTGACCACATCTTCTTCCTGGTGTACGTGGCAGGGGTGCTGTGTAGCCAGTTCATCTTCGCTGTGCTCTGGATGTGGGCGACATGCAAGTCGGACCCAGCCCCTGGTGAGGCTGCACCCCACGGCGGGTGGCCCAGGCTG

Related Sequences

bmy_13788T0 Protein

Length: 463 aa      View alignments
>bmy_13788T0
MALWLLPHLTFLRLGTPQPLARVCGFSVPAVDWPSFFNLNSPQEVQETIQIPNNGSAPLLVDMQVFVSNVFNVDILRYTVSSTMLLRLSWLDTRLALNSTGHRQGRVTLPWDSLWTPGLTIREALWVSWQDQSPQARVDRDGHIELYLALTTETYCDFELFHFPRDQSDCSLSFFAFGNTVMELEFQAHAVNEIVSVKREYVVQDLKTQVPSQQLVPCFQATLRPQNTALKAIIALLVPGEALPLADPCGPLLPLRTEHIAYKVTLLLGYLVFHSSLVQALPSSSSCKPLLSKAHTLAWPGAGPPCAGPTSFCPHLLSPKPGRLCSGAWALKAGPGPCPPLPAHLPSSLLHCPMLLFISTTETVLLSGLLAHSNLRAESSPSPVLRGEQHDCGSPGPDPEEASRGVKGSRRSWPEAADHIFFLVYVAGVLCSQFIFAVLWMWATCKSDPAPGEAAPHGGWPRL