Part of scaffold_915 (Scaffold)

For more information consult the page for scaffold_915 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

YIPF2 ENSTTRG00000016646 (Bottlenosed dolphin)

Gene Details

Yip1 domain family, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015781, Bottlenosed dolphin)

Protein Percentage 97.04%
cDNA percentage 96.39%
Ka/Ks Ratio 0.0999 (Ka = 0.0132, Ks = 0.1319)

YIPF2 ENSBTAG00000025606 (Cow)

Gene Details

protein YIPF2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035972, Cow)

Protein Percentage 88.67%
cDNA percentage 90.31%
Ka/Ks Ratio 0.19068 (Ka = 0.0612, Ks = 0.321)

YIPF2  (Minke Whale)

Gene Details

Yip1 domain family, member 2

External Links

Gene match (Identifier: BACU020467, Minke Whale)

Protein Percentage 95.07%
cDNA percentage 95.73%
Ka/Ks Ratio 0.23867 (Ka = 0.0266, Ks = 0.1116)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 612 bp    Location:50634..56363   Strand:+
>bmy_13729
ATGGCAGCGGCAGACGAGCTGGCCTTCCACGGCCCCTTCTGGATCTGTGCCACACTGGCCTTCGTCTTGGCCGTCACCGGCAACCTGACCCTGGTGCTGGCCCAGAGGAGGGATCCCTCCATCCACTACAGCCCCCAGTTCCACAAAGTGACCGTGGCTGGCACCGCCATCTACTGCTACGCGTGGCTCGTGCCGCTGGCGCTGTGGGGCTTCCTGCAGTGGCGCAAGGGTGTCCGGGAGCGCATGGGGCCTTACACCTTCCTGGAGATGGTGTGCGTCTACGGCTACTCCCTCTTTGTCTTCATCCCCACTGTGGTCCTGTGGCTCATCCCTGTCCCCTGGCTGCAGTGGCTCTCCGGGGCCCTGGCCCTGGCCCTGTCAGCCGCGGGCCTGGTGTTCACCCTCTGGCCCGTCGTCCGTGAGGACAGCCGGTTGGCGGCGGTGCTGCTGCTGTCCGTGGTGGTGCTGCTGCACGCCCTCCTGGCCACGGGCTGTAAGTTTTACTTCTTCCAGCCGCTGCCTCCGGAGCCCGCGGCAGCTCCCCACCAGGCCACGTCTCAGCCCCCAACCGTACTACTGTCGCTGCCCCCGCCAAGGTCCGCAGCAGCCTAG

Related Sequences

bmy_13729T0 Protein

Length: 204 aa      View alignments
>bmy_13729T0
MAAADELAFHGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGTAIYCYAWLVPLALWGFLQWRKGVRERMGPYTFLEMVCVYGYSLFVFIPTVVLWLIPVPWLQWLSGALALALSAAGLVFTLWPVVREDSRLAAVLLLSVVVLLHALLATGCKFYFFQPLPPEPAAAPHQATSQPPTVLLSLPPPRSAAA*