Part of scaffold_918 (Scaffold)

For more information consult the page for scaffold_918 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM55B ENSTTRG00000007865 (Bottlenosed dolphin)

Gene Details

transmembrane protein 55B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007435, Bottlenosed dolphin)

Protein Percentage 93.26%
cDNA percentage 93.61%
Ka/Ks Ratio 0.49409 (Ka = 0.0541, Ks = 0.1094)

TMEM55B ENSBTAG00000002748 (Cow)

Gene Details

transmembrane protein 55B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003561, Cow)

Protein Percentage 99.56%
cDNA percentage 96.65%
Ka/Ks Ratio 0.01752 (Ka = 0.0021, Ks = 0.1197)

TMEM55B  (Minke Whale)

Gene Details

transmembrane protein 55B

External Links

Gene match (Identifier: BACU008586, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 98.84%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0395)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 708 bp    Location:606798..610367   Strand:+
>bmy_13713
ATGGCGGCAGATGGAGAGCGATCCCCGCTGCTCTCTGAGCCCATCGACGGTGGCGCCGGCGGCAACGGATTAGTGGGGCCGGGCGGGAGTGGGGCTGGGCCCGGGGGAGGCCTGACCCCCTCCGCACCACCGTACGGAGCCGCATTTCCCCCGTTCCCCGAGGGACACCCAGCCGTGTTGCCCGGGGAGGACCCACCCCCCTATTCACCCCTGACCAGCCCGGACAGTGGGAGTGCTCCCATGATCACGTGCAGAGTCTGCCAGTCTCTCATCAACGTGGAAGGCAAGATGCATCAACATGTAGTCAAATGTGGCGTCTGCAATGAAGCCACTCCAATCAAGAATGCACCCCCAGGGAAAAAATATGTTCGATGCCCCTGCAACTGTCTCCTTATCTGCAAAGTGACTTCCCAGCGGATCGCCTGCCCTCGGCCATACTGTCTTTTTCTCCTGTACAGCAAAAGAATCATCAACCTGGGGCCTGTGCATCCGGGACCTTTGAGTCCAGAACCACAACCTGTGGGTGTCAGGGTCATCTGTGGACATTGCAAGAATACTTTTCTGTTTGGCACGTGGAAGCATGCACAACGATACGGAGGCATCTATGCAGCCTGGGCATTTGTCATCCTGTTGGCTGTGCTGTGTTTGGGCCGGGCCCTCTATTGGGCCTGTATGAAGGTCAGCCACCCTGTCCAGAACTTCTCCTGA

Related Sequences

bmy_13713T0 Protein

Length: 236 aa      View alignments
>bmy_13713T0
MAADGERSPLLSEPIDGGAGGNGLVGPGGSGAGPGGGLTPSAPPYGAAFPPFPEGHPAVLPGEDPPPYSPLTSPDSGSAPMITCRVCQSLINVEGKMHQHVVKCGVCNEATPIKNAPPGKKYVRCPCNCLLICKVTSQRIACPRPYCLFLLYSKRIINLGPVHPGPLSPEPQPVGVRVICGHCKNTFLFGTWKHAQRYGGIYAAWAFVILLAVLCLGRALYWACMKVSHPVQNFS*