Part of scaffold_909 (Scaffold)

For more information consult the page for scaffold_909 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC8D ENSTTRG00000004242 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 8 family, member D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003978, Bottlenosed dolphin)

Protein Percentage 99.83%
cDNA percentage 98.51%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0494)

LRRC8D ENSBTAG00000020958 (Cow)

Gene Details

leucine-rich repeat-containing protein 8D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027912, Cow)

Protein Percentage 98.68%
cDNA percentage 95.1%
Ka/Ks Ratio 0.02578 (Ka = 0.0052, Ks = 0.2029)

LRRC8D  (Minke Whale)

Gene Details

leucine rich repeat containing 8 family, member D

External Links

Gene match (Identifier: BACU006378, Minke Whale)

Protein Percentage 99.67%
cDNA percentage 99.12%
Ka/Ks Ratio 0.04421 (Ka = 0.0009, Ks = 0.0196)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1821 bp    Location:256126..254306   Strand:-
>bmy_13679
ATGATCAGCAAAACTGGCTTAAAATTTTCAGCTGAAAAGCCCGTGATTGAAGTCCCCAGCATGACCATCCTGGACAAAAAAGACGGGGAACAGGCCAAAGCCCTGTTTGAGAAAGTGAGGAAGTTCCGTGCTCACGTGGAAGACAGTGACTTGATCTATAAACTCTATGTGGTCCAAACAGTTATCAAAACAGCCAAGTTCATTTTTATTCTCTGCTACACTGCAAACTTTGTCAATGCGATCAGCTTTGAACACGTGTGCAAGCCCAAAGTCGAGCACCTGACTGGTTACGAGGTGTTCGAGTGCACCCACAACATGGCATACATGCTGAAAAAGCTGCTCATCAGTTACATATCCATTATTTGTGTTTATGGTTTCATCTGCCTCTACACTCTCTTCTGGTTATTCAGGATACCTTTGAAGGAATATTCTTTTGAAAAAGTCAGAGAAGAGAGCAGTTTCAGCGACATTCCAGATGTCAAAAATGATTTTGCGTTCCTTCTACACATGGTAGACCAGTATGACCAGCTCTATTCCAAGCGTTTCGGGGTGTTCTTGTCAGAAGTCAGTGAAAATAAACTGAGGGAAATTAGTTTGAACCACGAGTGGACATTTGAAAAACTGAGGCAGCACGTGTCACGCAACGCCCAGGACAAGCAGGAGCTGCATCTGTTTATGCTCTCAGGTGTGCCCGATGCTGTCTTCGACCTCACAGACCTGGATGTGCTAAAACTCGAGCTGATTCCAGAAGCTAAAATTCCTGCTAAGATTTCTCAGATGACTAATCTCCAAGAGCTTCACCTCTGCCACTGCCCTGCAAAAGTGGAACAGACTGCTTTTAGCTTTCTCCGTGATCACTTGAGATGCCTTCACGTGAAGTTCACTGACGTGGCAGAAATTCCCGCCTGGGTGTATCTGCTCAAAAACCTTCGCGAGCTGTACTTGATAGGCAACTTGAACTCTGAAAACAATAAGATGATAGGACTTGAATCTCTCCGAGAGTTGCGGCACCTTAAGATTCTCCACGTGAAGAGCAATCTGACCAAAGTCCCCTCCAACATTACAGATGTGGCTCCACATCTCACCAGGTTAGTCGTTCATAATGACGGCACTAAACTCTTGGTACTGAACAGCCTTAAGAAGATGATGAATGTCGCCGAGCTCGAACTCCAGAACTGTGAGCTAGAGAGAATTCCACATGCTATTTTCAGCCTCTCTAATTTACAGGAACTAGATTTAAAGTCAAATAACATACGCACAATTGAAGAAATCATCAGTTTCCAGCATTTAAAACGACTGACTTGTTTAAAATTATGGCATAATAAAATCGTTACCATTCCACCCTCCATCACCCACGTCAAAAACTTGGAGTCACTTTATTTCTCTAACAACAAGCTCGAATCCCTACCTGTGGCAGTGTTTAGTTTACAGAAACTCAGATGCTTAGATGTAAGCTACAACAACATTTCCATGATCCCARTAGAAATAGGATTACTTCAGAACCTGCAGCATTTGCATATCACRGGGAACAAAGTGGACGTTCTACCAAAACAGTTGTTTAAATGCATTAAGTTGAGGACTTTGAATCTGGGGCAGAACTGCATCACCTCCCTCCCGGAGAAGATCGGTCAGCTCTCCCAGCTCACCCAGCTGGAGCTGAAAGGGAACTGCTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCGCCTGCTCAAGAAAAGCGGRCTTGTTGTGGAAGATCACCTTTTTGACACCCTGCCACTCGAAGTCAAAGAAGCATTGAATCAAGACATAAATATTCCCTTTGCAAATGGGATTTAA

Related Sequences

bmy_13679T0 Protein

Length: 607 aa      View alignments
>bmy_13679T0
MISKTGLKFSAEKPVIEVPSMTILDKKDGEQAKALFEKVRKFRAHVEDSDLIYKLYVVQTVIKTAKFIFILCYTANFVNAISFEHVCKPKVEHLTGYEVFECTHNMAYMLKKLLISYISIICVYGFICLYTLFWLFRIPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQHVSRNAQDKQELHLFMLSGVPDAVFDLTDLDVLKLELIPEAKIPAKISQMTNLQELHLCHCPAKVEQTAFSFLRDHLRCLHVKFTDVAEIPAWVYLLKNLRELYLIGNLNSENNKMIGLESLRELRHLKILHVKSNLTKVPSNITDVAPHLTRLVVHNDGTKLLVLNSLKKMMNVAELELQNCELERIPHAIFSLSNLQELDLKSNNIRTIEEIISFQHLKRLTCLKLWHNKIVTIPPSITHVKNLESLYFSNNKLESLPVAVFSLQKLRCLDVSYNNISMIPXEIGLLQNLQHLHITGNKVDVLPKQLFKCIKLRTLNLGQNCITSLPEKIGQLSQLTQLELKGNCLDRLPAQLGQCRLLKKSGLVVEDHLFDTLPLEVKEALNQDINIPFANGI*