Part of scaffold_907 (Scaffold)

For more information consult the page for scaffold_907 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POPDC3 ENSTTRG00000014938 (Bottlenosed dolphin)

Gene Details

popeye domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014162, Bottlenosed dolphin)

Protein Percentage 88.97%
cDNA percentage 90.0%
Ka/Ks Ratio 0.2465 (Ka = 0.0206, Ks = 0.0835)

POPDC3 ENSBTAG00000046017 (Cow)

Gene Details

popeye domain-containing protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056630, Cow)

Protein Percentage 95.88%
cDNA percentage 95.3%
Ka/Ks Ratio 0.18249 (Ka = 0.0209, Ks = 0.1144)

POPDC3  (Minke Whale)

Gene Details

popeye domain containing 3

External Links

Gene match (Identifier: BACU014175, Minke Whale)

Protein Percentage 86.94%
cDNA percentage 89.81%
Ka/Ks Ratio 0.64119 (Ka = 0.0992, Ks = 0.1547)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 876 bp    Location:677774..673344   Strand:-
>bmy_13675
ATGGAAAGAAATTCAAGTTTATGGAAGAACCTAATAGATGAGCACCCAGTCTGCACCATCTGGAAGCAACAGGCCGAAGGAGCCATCTATCATCTTGCCAGTATTTTATTTGTAGTAGGTTTCATGGGTGGCAGTGGATTCTTCGGGCTCCTTTATGTCTTCAGTTTGCTGGGGTTGGGTTTTCTCTGTTCTGCTATCTGGGCTTGGGTAGATGTCTGTGCAGCTGACATATTTTCCTGGAATTTTATATTGTTTGTCATCTGCTTCATGCGGTTTGTTCATATCGCCTATCAAGTTCGCAGCATAACCTTTGCGCGAGAATTTCAGCTGCTGTACAGCTCCCTCTTCCAGCCTCTGGGGACCTCTTTGCCTGACTTCAGAACTATTGCTATGAGCTCAGAAGTGGTTACTTTGGAAAAGGAGCACTGTTATGCCATGCAGGGGAAAACCTCCATTGACAAACTCTCCCTGCTTGTTTCAGGAAGGATCAGAGTGACAGTTGATGGCGAATTTCTGCATTACATTTTCCCCTTCCAGTTCCTGGATTCTCCTGAATGGGACTCACTGAAACCCACASAGGAAGGCATTTTTCAGGTAACCCTCACAGCAGAAACTGATTGTCGATATGTGTCCTGGAGGAGAAAGAAATTATACTTGCTCTTGGCTCAGCATCGTTACATCTCCCGCCTGTTTTCAGTTTTAATTGGCAGTGACATTGCAGATAAACTCTATGCCTTGAATGACAGGGTATATATAGGAAAAAGATACCATTATGATATTCGGTTACCCAACTTCTATCAAATGTCAAGTCCTGAAATGTCCAGATCAGCCCTGACAGAACATTTTCAGAATTCCAGACGACATTGTGATAAATGA

Related Sequences

bmy_13675T0 Protein

Length: 292 aa      View alignments
>bmy_13675T0
MERNSSLWKNLIDEHPVCTIWKQQAEGAIYHLASILFVVGFMGGSGFFGLLYVFSLLGLGFLCSAIWAWVDVCAADIFSWNFILFVICFMRFVHIAYQVRSITFAREFQLLYSSLFQPLGTSLPDFRTIAMSSEVVTLEKEHCYAMQGKTSIDKLSLLVSGRIRVTVDGEFLHYIFPFQFLDSPEWDSLKPTZEGIFQVTLTAETDCRYVSWRRKKLYLLLAQHRYISRLFSVLIGSDIADKLYALNDRVYIGKRYHYDIRLPNFYQMSSPEMSRSALTEHFQNSRRHCDK*