Part of scaffold_907 (Scaffold)

For more information consult the page for scaffold_907 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HACE1 ENSTTRG00000012846 (Bottlenosed dolphin)

Gene Details

HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012191, Bottlenosed dolphin)

Protein Percentage 94.08%
cDNA percentage 94.72%
Ka/Ks Ratio 0.34017 (Ka = 0.0405, Ks = 0.1192)

HACE1 ENSBTAG00000001533 (Cow)

Gene Details

E3 ubiquitin-protein ligase HACE1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002010, Cow)

Protein Percentage 94.44%
cDNA percentage 93.61%
Ka/Ks Ratio 0.22508 (Ka = 0.0394, Ks = 0.1749)

HACE1  (Minke Whale)

Gene Details

HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1

External Links

Gene match (Identifier: BACU014173, Minke Whale)

Protein Percentage 94.04%
cDNA percentage 94.86%
Ka/Ks Ratio 0.3872 (Ka = 0.0416, Ks = 0.1075)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2412 bp    Location:475051..324376   Strand:-
>bmy_13673
ATGCTTCGGTTCTTCTTAAAACTAGGAGGAGGGGCTGCGGCACTGCGACGAGCGGCTCCACCCGTGCTCTGCGTCCCGGCCGACAAGGCCGGGGTCTGCAGCCCCGCGCTGCCCTCGCAGCCGCGGATCTTCACGCGCAGCTCGCGCCCCCAGGGTCGCCGAGACCCCCAGGAACAGCTTTGCCTCTTTGAGGAAGGAGAAGCTGAGAAAGACCAAGCTCTTTGGTTCTCTCTTAACTCCAGCATCATCTTGGCACTGGTTATGTCCAAGAAGACAAAATTCCTCTTTTCATTGTCAGTGGTGTTAGATAATGAAACTGCTGTTTATACATTAATGCCAATGGTTATGGCTGATCAACACAGGTCTGTTTCTGAGCTACTATCAAATTCAAAGTTTGATGTCAATTATGCATTTGGACGTGTGAAAAGAAGCTTGCTTCACATTGCAGCAAATTGTGGATCGGTGGAATGCTTGGTTCTGCTTTTAAAGAAAGGAGCAAATCCTAACTATCAAGATATTTCAGGCTGTACACCCCTTCATTTGGCAGCTAGAAATGGGCAGAAGAAATGCATGAGTAAATTATTAGAATACAATGCTGATGTCAACATTTGTAATAATGAAGGCCTTACAGCAATACACTGGCTGGCTGTGAATGGGCGGACAGAACTACTCCATGACCTTGTACAACACGTCAGTGACGTCGATGTTGAGGACGCGATGGGGCAGACAGCGCTGCATGTGGCCTGCCAGAACGGTCACAAGACGACAGTGCAATGCTTGCTAGACAGTGGTGCTGATATTAACAGGCCGAATGTATCAGGAGCCACTCCATTGTACTTTGCTTGCAGTCATGGTCAGAGAGACACAGCACAGATTCTTCTGTTGCGAGGAGCCAAATATCTGCCAGATAAAAATGGAGTAACCCCTCTGGATTTATGTGTACAGTTACGGCAAGTTCTGGAGCATTTATCTCAGCAAAGTGAGAACCAGTATTTAAAGATTCTGACAAGCCTTGCTGAAGTTGCCACAACAAATGGTCATAAGTTGCTTAGCATATCTAGTAATTATGATGCTCAAATGAAGAGCCTTTTAAGGATTGTGAGGATATTTTGTCATGTCTTTCGAATTGGTCCATCCTCTCCCAGTAATGGAATCGATATGGGCTACAATGGGAATAAAACTCCAAGAAGCCAGGTGTTCAAGCTGCTGCTTCTTTATAAGCACATTTATGAATGGAATCCTTGGAAGAAAGTTTTCCAAGGCAGTGTAACGATGTCAAATTACAATTTTGTGAAAATGACTTCACCCCGTTTCATTGAATTTGTCTGCAAACATGATGAAGTTTTAAAATGCTTTGTTAACAGGAATCCCAAGATTATATTTGACCACTTTCACTTCCTCCTTGAATGTCCTGAACTGATGTCAAGATTCATGCATATCATAAAAGCACAGCCATTTAAAGATCGCTGTGAATGGTTCTATGAACATTTGCATTCAGGACAGCCAGATTCAGACATGGTGCACAGGCCAGTGAATGAAAATGATATCCTGCTGGTTCACAGAGATTCTATTTTTAGGAGTAGCTGTGAAGTTGTGTCAAAAGCAAATTGTGCAAAGCTAAAGCAAGGAATTGCTGTACGGTTTCATGGAGAAGAAGGCATGGGTCAAGGTGTTGTGCGAACAACTTTTCAACCTAATAGCAACTCCTATGTAAATCCTGATCACTTGAACTATTTCCGGTTTGCTGGACAGATCTTGGGATTAGCTCTGAACCATAGGCAGCTGGTGAACATTTACTTCACGAGATCATTCTACAAGCACATTCTTGGTATTCCTGTGAATTACCAAGATGTGGCATCCATTGATCCAGAATATGCCAAAAATTTGCAGTGGATTTTAGATAATGATATTAGTGATTTGGGTCTAGAACTAACTTTTTCTGTTGAGACTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGAAGTATTCTTGTAACACAAAATAACAAAGAGCTACTGCTTTCTGGCATGCCAGAAATTGATGTGAGTGATTGGATAAAAAATACTGAATACACAAGTGGCTATGAAAGAGAAGATCCAGTTATTCAGTGGTTCTGGGAAGTTGTGGAAGATATTACTCCAGAGGAGAGAGTTCTTCTGTTGCAGTTTGTTACTGGCAGTTCCAGGGTCCCACATGGTGGATTTGCTAATATCATGGGTGGAAGTGGATTGCAAAACTTTACAATTGCTGCTGTGCCATATACTCCAAATCTTCTACCGACTTCAAGCACATGCATCAACATGCTCAAGTTACCTGAATACCCAAGTAAAGAAATACTCAAGGACAGGCTTCTTGTGGCACTACATTGTGGCAGCTATGGTTACACAATGGCATAA

Related Sequences

bmy_13673T0 Protein

Length: 804 aa      View alignments
>bmy_13673T0
MLRFFLKLGGGAAALRRAAPPVLCVPADKAGVCSPALPSQPRIFTRSSRPQGRRDPQEQLCLFEEGEAEKDQALWFSLNSSIILALVMSKKTKFLFSLSVVLDNETAVYTLMPMVMADQHRSVSELLSNSKFDVNYAFGRVKRSLLHIAANCGSVECLVLLLKKGANPNYQDISGCTPLHLAARNGQKKCMSKLLEYNADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVSDVDVEDAMGQTALHVACQNGHKTTVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKYLPDKNGVTPLDLCVQLRQVLEHLSQQSENQYLKILTSLAEVATTNGHKLLSISSNYDAQMKSLLRIVRIFCHVFRIGPSSPSNGIDMGYNGNKTPRSQVFKLLLLYKHIYEWNPWKKVFQGSVTMSNYNFVKMTSPRFIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQPDSDMVHRPVNENDILLVHRDSIFRSSCEVVSKANCAKLKQGIAVRFHGEEGMGQGVVRTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKELLLSGMPEIDVSDWIKNTEYTSGYEREDPVIQWFWEVVEDITPEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGYTMA*