Part of scaffold_891 (Scaffold)

For more information consult the page for scaffold_891 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX54 ENSTTRG00000016678 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 54

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015813, Bottlenosed dolphin)

Protein Percentage 92.81%
cDNA percentage 94.57%
Ka/Ks Ratio 0.29417 (Ka = 0.0182, Ks = 0.0618)

DDX54 ENSBTAG00000011930 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029524, Cow)

Protein Percentage 93.9%
cDNA percentage 92.77%
Ka/Ks Ratio 0.0727 (Ka = 0.0261, Ks = 0.3584)

DDX54  (Minke Whale)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 54

External Links

Gene match (Identifier: BACU003440, Minke Whale)

Protein Percentage 98.64%
cDNA percentage 98.46%
Ka/Ks Ratio 0.08037 (Ka = 0.0051, Ks = 0.0629)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2217 bp    Location:382901..402946   Strand:+
>bmy_13621
ATGGCCCGGACAGGCAGTGGCAAGACGGCCTGCTTCCTCATCCCCATGTTCGAGAGGCTCAAGACCCACATCGCCCAGACTGGGGCCCGCGCCCTCATCCTCTCACCCACCCGAGAGCTGGCCCTGCAGACCATGAAGTTCACCAAGGAGCTGGGCAAGTTCACTGGCCTCAAGACTGCCCTGATACTGGGCGGGGACAAGATGGAAGACCAATTTTCAGCCCTGCACGAAAATCCCGACATAATCATTGCTACCCCTGGGCGCTTGGTGCATGTGGCTGTGGAGATGAACCTAAAGCTGCAGAGCGTGGAATATGTGGTATTTGATGAGGCTGACAGGCTCTTTGAAATGGGGTTCGCAGAGCAGCTGCAGGAAATCATCGGCCGCCTCCCTGGGGGCCACCAGACTGTCCTGTTCTCTGCCACGCTGCCCAAGCTGCTGGTGGAGTTCGCCCGGGCTGGCCTCATGGAGCCCGTGCTCATCCGGCTAGACGTGGACTCCAAACTCAACGAGCAGCTCAAGACCTCCTTCTTCCTCGTGCGGGAGGATGCTAAGGCTGCTGTGCTGCTCCACCTGCTGCGCAACATGGTGCGGCCGCAGGACCAGACGGTGGTGTTTGTGGCCACCAAGCACCACGCGGAGTATCTCAGTGAGCTGCTGACGACCCAGCGGGTGAGCTGCGCCCACATCTACAGCGCCCTGGACCAGACGGCCCGCAAGATCAACCTGGCCAAGTTCATGCACGGCAAGTGCTCGGCCCTCATCGTGACTGACCTGGCAGCCCGGGGCCTGGACATCCCACTGCTGGACAACGTCATCAACTACAGCTTCCCCGCCAGGGGCAAGCTCTTCTTGCACCGCGTGGGCCGTGTGGCCCGGGCTGGCCGAAGCGGCACGGCCTACTCCTTGGTGGCCCCAGATGAGGTCCCCTACCTGCTGGACCTGCACCTGTTCCTGGGCCGTGCCCTGACCCTCGCCCGTCCCCACGAGGAGCCCTCCGGCGCGGGCGGCGGGGACGGCGTGCTGGGCCGGGTGCCGCAGGGCGTGGTGGACGATGAGGACTGCGGTCTGCGGACCAGCCTGGAGGCGTCGCTGGAGCTTCGGGGCCTGGGCCGCGTGGCCGACAACGCCCAGCAGCAGTATGTGCGCTCGCGGCCGGCGCCCTCGCCCGAGTCCATCAAGAGGGCCAAGGAGCTGGACCTCTCGGGCCTGGGCCTGCACCCCCTCTTCAGCTCGTGCTTCCAGGAGGAGGAGTTACAGCAGCTGCGGCTGGTGGACAGCATCAGGAACTACCGCTCCCGGGCGACCATCTTTGAGATCAACGCTTCCAGCCGGGACCTGAGCAGCCAGGTGATGCGTGCCAAGCGGCAGAAGGATCGCAAATCCATCGCCAGCTTCCGGCAGGAGCGGCAGGAGCGGCAGGAGAGCCTGGCCGTCCCAGCCCCGAGCCTCCCAGCACCGCAGGAGGAGCAGCCTGAGAAGGAGGAGGYGGCAGCAGAGAGTGTGGAGGACATCTTCACAGAGGTTGTGGGCCGGAAGCGGCAGCAGCCAGGACCCGACCGAGGAGCCAAGAGGCGGAGGGAGGAGGTCCGGCAGCAGGACCAGGCGTTCTTCATCCCCTACCGGCCCAAGGACTTCGACAGCGAGCGGGGCCTGAGCATCGGTGGGGATGGGGGTGCCTTCGAGCAGCAGGTGGCTGGCGCGGTCTTGGACCTGATGGGGGACGAAGCCCAGAGCCTGACCAGGGGCCAGCAGCAGCTCAAGTGGGACCGGAAGAAGAAGCGGTTTGTGGGACAGTCGGGACAGGAGGACAAGAAAAAGATCAAGACGGAGAGTGGCCGCTACATCAGCAGCTCCTACAAGAGGGACCTCTACCAAAAGTGGAAACAGAAGCAGAAAATTGATGATCGTGACTCAGAAGAAGAAGGGACATTTGGCCGGCGTGGCCCAGAGCGAAGAGGTGGTAAGCGCGGCCGAGGGCAAGGTGCATCCCAGCCCCGCACCCCTGGTGCCCCCGCAGGCCGCGTGCGCTCAGAGCTCAAGACCAAGCAGCAGATCCTGAAGCAGCGGTGCCGAGCCCAGAAGCTGCGCTTCCTGCAGCGTGGGGGCCTCAAGCAGCTCTCTGCCCGCAACCGGCGCCGTGCCCGGGAGCTGCAGCAGGGCGCCTTTGGCCGGGGCGCACACTCCAAGAAGGGCAAGATGAGGAAGAGCCTGTAA

Related Sequences

bmy_13621T0 Protein

Length: 739 aa      View alignments
>bmy_13621T0
MARTGSGKTACFLIPMFERLKTHIAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFSALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLMEPVLIRLDVDSKLNEQLKTSFFLVREDAKAAVLLHLLRNMVRPQDQTVVFVATKHHAEYLSELLTTQRVSCAHIYSALDQTARKINLAKFMHGKCSALIVTDLAARGLDIPLLDNVINYSFPARGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPHEEPSGAGGGDGVLGRVPQGVVDDEDCGLRTSLEASLELRGLGRVADNAQQQYVRSRPAPSPESIKRAKELDLSGLGLHPLFSSCFQEEELQQLRLVDSIRNYRSRATIFEINASSRDLSSQVMRAKRQKDRKSIASFRQERQERQESLAVPAPSLPAPQEEQPEKEEXAAESVEDIFTEVVGRKRQQPGPDRGAKRRREEVRQQDQAFFIPYRPKDFDSERGLSIGGDGGAFEQQVAGAVLDLMGDEAQSLTRGQQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEEEGTFGRRGPERRGGKRGRGQGASQPRTPGAPAGRVRSELKTKQQILKQRCRAQKLRFLQRGGLKQLSARNRRRARELQQGAFGRGAHSKKGKMRKSL*