Part of scaffold_891 (Scaffold)

For more information consult the page for scaffold_891 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPCN1 ENSTTRG00000004569 (Bottlenosed dolphin)

Gene Details

two pore segment channel 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004338, Bottlenosed dolphin)

Protein Percentage 92.19%
cDNA percentage 92.51%
Ka/Ks Ratio 0.19482 (Ka = 0.0331, Ks = 0.1697)

TPCN1 ENSBTAG00000011102 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029529, Cow)

Protein Percentage 89.81%
cDNA percentage 89.46%
Ka/Ks Ratio 0.15379 (Ka = 0.0613, Ks = 0.3983)

TPCN1  (Minke Whale)

Gene Details

two pore segment channel 1

External Links

Gene match (Identifier: BACU003442, Minke Whale)

Protein Percentage 95.77%
cDNA percentage 96.12%
Ka/Ks Ratio 0.25485 (Ka = 0.0264, Ks = 0.1037)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2562 bp    Location:349757..288193   Strand:-
>bmy_13618
ATGGCCGTGAGTTTAGATGACGACGTTCCCCTCATCCTGACCTTGGATGAGGGTGGCAGCACCCCACTGGCTCCCTCCAACGGCCTGGGCCAAGAGGATCTGCCCAGCAGAAATGGAGGCAAATATGCCGTCCACGACTCCTGCACCCCTAGTCTAAGCTCAGGGGGCGAGAGTTCCCCTTCCAGCCTCACCGGACACAGCTGGGAGATGAATTATCAAGAGGCAGCAATCTACCTCCAGGAAGGTGAGAATAATGACAAGTTCTTCACCCACCCCAAGAATGCCAAAGCGCTGGCGGCCTACCTCTTTGCTCATAACCACCTCTTCTACCTGATGGAGCTGTCCGCGGCCCTGCTCCTATTGCTGCTGTCCCTGTGCGAGGCTCCGGCCGTGCCCGCGCTCCGGCTGGGCATTTACGTCCACGCGACCCTGGAGCTGTTTGCCCTGATGGTGGTCGTGTTTGAACTCTGCATGAAGTTGCGGTGGCTGGGCCTTCACACCTTCATCCGGCACAGACGGACCATGGTCAAGACCTCTGTGCTGGTGGTGCAGTTCGTTGAGGCCATCGTGGTGTTGGTACGGCAGACGTCCCACGTGCGGGTGACCCGGGCACTGCGCTGCATCTTCCTGGTGGACTGTCGGTACTGCGGTGGCGTCCGGCGCAACCTGCGCCAGATTTTCCAGTCCCTGCCGCCCTTCATGGACATCCTCTCACTGCTCCTCTTCTTCATGATCATTTTCGCCATCCTTGGTGAGTTTCTCCTGCGCCCCAGGATGCAGGCGCTCGCTAAAAGCAAACTCACAGTTGAGAAAAAAAGCCACCGTGCCCTCCTCTCCTCCTCTCCCCCTCAGTACTTCAGCACCCTGGAGAACAGCATTGTCAGTCTGTTTGTCCTTCTGACCACCGCCAAGTTCTTGGGACCCCGTGAGGGATGGGAGTGGCCTGGTGAGCCTAGAGTAGGGGAGGGGGGAGGGGGCCGGGAAGGCAGGAGAAGAGATGTCCTTATAGAAGACGGAGACCAGCAGACACGGGCCCTGCCGGTAACACTCTGCAAACACAGCTTCCCAGATGTGATGATGCCCTCCTACTCCCGGAACCCCTGGTCCTGCGTCTTCTTCATCGTGTACCTCTCCATCGAGCTGTACTTCATCATGAACCTGCTTCTGGCCGTGGTATTTGACACCTTCAATGACATCGAGAAACACAAGTTCAAGTCTTTGCTGCTACACAAGCGAACCGCCATCCAGCACGCCTACCGCCTGCTCATCAGCCAACGGGGGCCTGCCGGCATCTCCTACAGGCAGTTTGAAGGCCTGATGCGCTTCTACAAGCCCCGGATGAGCGCCGGGGAGCGCTATCTCACGTTCAAGGCCCTGAATCAGAGCAACTCGCCTCTGCTCAGCCTGAAGGACTTTCAAGACATCTACGAAGTTGCCGCCTTGAAGTGGAAGGCAAAGAGAAATAGAGAGCACTGGTTTGATGAGCTTCCCAGGACAGCATTCCTCATCTTCAAAGGAATTAATATCCTTGTGAAGTCCAAGGCCTTCCAGTATTTCATGTACTTGGTGGTGGCAGTCAACGGGGTCTGGATCCTTGTGGAGACCTTCATGCTGAAAGGTGGGAACTTCTTCTCCAAGCATGTACCCTGGAGTTACCTCGTCTTTCTGACTACAGGGGAGCGTAATGAGGGTGGAGCAGAAATCGAGTCTGATTCTATCCCATCCCTGTTTCAAACTCTTTGGTTGTTTAAACTGAAGAAGCGTTACCGCAACGTGCTGGACACCATGTTTGAACTGCTGCCCCGGATGGCCAGCCTGGCCCTCACCCTGCTCATCTTTTACTACTCCTTCGCCATCGTGGGCATGGAATTCTTCTGTGGAATCCTCTACCCCAACTGCTGCAATACGAGCACAGTGGCAGACGCCTACCGCTGGCTCAATCACACCGTGGACAACAGGACCGTGGTGGAAGAAGGCTACTACTATCTCAATAATTTTGACAACATCCTGAACAGCTTTGTGACCTTGTTTGAGCTCACAGTTGTCAACAACTGGTACATCATCATGGAAGGCGTCACCTCGCAGACCTCCCACTGGAGCCGCCTCTACTTCATGACCTTCTACATCGTGACCATGGTGGTGATGACTATCATTGTCGCCTTCATCCTCGAAGCCTTCGTCTTCCGAATGAACTACAGCCGCAAGAACCGGGACTCGGAAGTTGATGGCGGTATCACCCTTGAGAAGGAAATCTCCAAAGATGAGCTGATTGCTGTCCTGAAGCTCTACCGGGAGGCATGGGGAGCCTCCTCGGACATCGCCCAGCTGCTCAAGATCCTCTCCCAGATGGAGAGATACGAGCAAAATACCTTGGTGTTTCTGGGACGGAGATCGAGGACCAAAAGCGATCTGAGCCTAAAGATGTACCAAGAGGAGATTCAGGAGTGGTATGCGGAGCACGCCCGGAAGCAGGAGGAGCAGCAACGGCAGCTCAGCGGCTGCGTGGTCCCCACCGCCCAGCAGCCTCCGGGCGGCCGCCAGCGCTCCCAGACCATCACCTAA

Related Sequences

bmy_13618T0 Protein

Length: 854 aa      View alignments
>bmy_13618T0
MAVSLDDDVPLILTLDEGGSTPLAPSNGLGQEDLPSRNGGKYAVHDSCTPSLSSGGESSPSSLTGHSWEMNYQEAAIYLQEGENNDKFFTHPKNAKALAAYLFAHNHLFYLMELSAALLLLLLSLCEAPAVPALRLGIYVHATLELFALMVVVFELCMKLRWLGLHTFIRHRRTMVKTSVLVVQFVEAIVVLVRQTSHVRVTRALRCIFLVDCRYCGGVRRNLRQIFQSLPPFMDILSLLLFFMIIFAILGEFLLRPRMQALAKSKLTVEKKSHRALLSSSPPQYFSTLENSIVSLFVLLTTAKFLGPREGWEWPGEPRVGEGGGGREGRRRDVLIEDGDQQTRALPVTLCKHSFPDVMMPSYSRNPWSCVFFIVYLSIELYFIMNLLLAVVFDTFNDIEKHKFKSLLLHKRTAIQHAYRLLISQRGPAGISYRQFEGLMRFYKPRMSAGERYLTFKALNQSNSPLLSLKDFQDIYEVAALKWKAKRNREHWFDELPRTAFLIFKGINILVKSKAFQYFMYLVVAVNGVWILVETFMLKGGNFFSKHVPWSYLVFLTTGERNEGGAEIESDSIPSLFQTLWLFKLKKRYRNVLDTMFELLPRMASLALTLLIFYYSFAIVGMEFFCGILYPNCCNTSTVADAYRWLNHTVDNRTVVEEGYYYLNNFDNILNSFVTLFELTVVNNWYIIMEGVTSQTSHWSRLYFMTFYIVTMVVMTIIVAFILEAFVFRMNYSRKNRDSEVDGGITLEKEISKDELIAVLKLYREAWGASSDIAQLLKILSQMERYEQNTLVFLGRRSRTKSDLSLKMYQEEIQEWYAEHARKQEEQQRQLSGCVVPTAQQPPGGRQRSQTIT*