Part of scaffold_905 (Scaffold)

For more information consult the page for scaffold_905 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DEPDC1 ENSTTRG00000002760 (Bottlenosed dolphin)

Gene Details

DEP domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002588, Bottlenosed dolphin)

Protein Percentage 62.08%
cDNA percentage 69.03%
Ka/Ks Ratio 0.50456 (Ka = 0.2209, Ks = 0.4378)

DEPDC1 ENSBTAG00000001343 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040158, Cow)

Protein Percentage 90.47%
cDNA percentage 91.65%
Ka/Ks Ratio 0.21901 (Ka = 0.0538, Ks = 0.2456)

DEPDC1  (Minke Whale)

Gene Details

DEP domain containing 1

External Links

Gene match (Identifier: BACU009941, Minke Whale)

Protein Percentage 43.46%
cDNA percentage 58.16%
Ka/Ks Ratio 0.54318 (Ka = 0.6048, Ks = 1.1135)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1458 bp    Location:358394..334926   Strand:-
>bmy_13603
ATGTTAACCTACATTTTAGCACTGGGGAGAATGGAACTGTGGCCCTTGCTAAAATCTACGAAGGGGACAAGCACTGCAACATACACCCAGGAAGCTTTCCAGAAGCAAAACCAAGGGATCTGTCAGGTGAAAAGTACGCCCCAGTGGAATGAAGTTACCACATCTTTTCGAGCGGGAATGCCTCTAAGGAAACACAGGCAACACTTTAAAAAATATGGCAATTGTTTTACAGCAGGAGAAGCGGTAGACTGGCTTTATGACCTGTTAAGAAATAATAGCAATTTTGGTCCTGAAGTTACAAGGCAACAGACTATCCAGCTATTGAGAAAATTTCTTAAGAACCATGTCATTGAAGATATCAAAGGCAAATGGGGATCAGAAAATCTTGATGACAACAGTCAGCTATTCAGATTTCCTGCAAATTCTCCACTTAAAACTCTTCCACGAAGGCATCCAGAATTGAGAAAAAACAGAATAGAGAACTTTTCCAAAGATAAAGATAGTATTTTTAAATTACGAAACTTATCTCGGAGAACTCCTAAAAAGCATGGATTACATTTCTCTCAGGAAAATGCAGAGAAAATGAACTGTGAAATAATCAATGAAGATCAAGAAAACTCAGTTGATAATAGAGAAATAAGCCAGAAAGACGTTGAAGAAGTTTGGAGATATGTTATTCTGATCTACCTGCAAACAATTTTAGGTGTGTCATCCCTAGAAGAAGTCATAAATCCCAAACAAGTAATTCCTCAGTATATAATGTACAACATGACCAATACAAGTAAGCATGGAGTAGTTATACTGCAAGACAAATCAGGGCCAAGAAGTAATGATATGAATAATCCAAGTTATGTTGGATTTGAACGAGATGTATTCAGAACAATTGCAGATTATTTTCTAGATCTCCCTGAACCTCTACTTACCTTTGAATATTATGAATTATTTGTGAACATTTTGGGTTTGCTACAACCTCATTTAGAGAGGGTTGCCATCGATGCACTACAGTTGTGTTGTTTGTTACTTCCCCCACCAAATCGTAGACGGCTTCAACTTTTAATGCGCATGATTTCGCGAATGAGTCAAAATGTTGATATGCCCCAACTTCATGATGCAATGGGTACAAGATCACTGATTAAAAATCCTGGAGATGGAGTGATTGCTCCTTTGCCAACGTATTCATACTGTAAACAAATTAGTGCTCAAGAGTTTGATGAACAAAAAGTTTCTACCTCTCAAGCTGCAGTTGCAGAACTTTTAGAGAATATTATTAAAAATAAGAGTTTGCCTGTAAAGGAGAAAAGGAAAAMACTAAAACAGTTTCAGAAGGAATATCCCTTGATATATCAGAAAAGATTTCCAACCTCTGAAAGTGAAGCAGCACTTTTTGGTGACAAACCTACAATCAAGCAACCAATGCTAATTTTAAGAAAACCAAAGTTTCGTAGTTTAAGATACTAA

Related Sequences

bmy_13603T0 Protein

Length: 486 aa      View alignments
>bmy_13603T0
MLTYILALGRMELWPLLKSTKGTSTATYTQEAFQKQNQGICQVKSTPQWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKGKWGSENLDDNSQLFRFPANSPLKTLPRRHPELRKNRIENFSKDKDSIFKLRNLSRRTPKKHGLHFSQENAEKMNCEIINEDQENSVDNREISQKDVEEVWRYVILIYLQTILGVSSLEEVINPKQVIPQYIMYNMTNTSKHGVVILQDKSGPRSNDMNNPSYVGFERDVFRTIADYFLDLPEPLLTFEYYELFVNILGLLQPHLERVAIDALQLCCLLLPPPNRRRLQLLMRMISRMSQNVDMPQLHDAMGTRSLIKNPGDGVIAPLPTYSYCKQISAQEFDEQKVSTSQAAVAELLENIIKNKSLPVKEKRKXLKQFQKEYPLIYQKRFPTSESEAALFGDKPTIKQPMLILRKPKFRSLRY*