Part of scaffold_888 (Scaffold)

For more information consult the page for scaffold_888 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCR7 ENSTTRG00000016910 (Bottlenosed dolphin)

Gene Details

chemokine (C-C motif) receptor 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016031, Bottlenosed dolphin)

Protein Percentage 92.82%
cDNA percentage 94.5%
Ka/Ks Ratio 0.15073 (Ka = 0.0364, Ks = 0.2413)

CCR7 ENSBTAG00000015133 (Cow)

Gene Details

C-C chemokine receptor type 7 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000052953, Cow)

Protein Percentage 90.77%
cDNA percentage 90.94%
Ka/Ks Ratio 0.07779 (Ka = 0.0449, Ks = 0.5777)

CCR7  (Minke Whale)

Gene Details

chemokine (C-C motif) receptor 7

External Links

Gene match (Identifier: BACU007039, Minke Whale)

Protein Percentage 99.37%
cDNA percentage 99.26%
Ka/Ks Ratio 0.04796 (Ka = 0.0024, Ks = 0.0501)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1230 bp    Location:441039..439113   Strand:-
>bmy_13564
ATGCTGGGTGCTGTGCCCTGGGCCGCAGGGATCCATAAGTCTTCAAGTCACTCACCACCCATGATCACAGCAGCTTGCCCCAAACCAGGGCTTTCTGGCCTCTTCATGGAGCTTTGCCTTCCTCTCTTCTCACTCCGGGCCCTCCTCAACGTATGCCTGTGCCAGGATGAGGTCACGGACGATTACATCGGAGACAACACCACAGTGGACTACACGCTGTACGAGTCCGTGTGCTTCAAGAAGGACGTGCGGAACTTTAAAGCCTGGTTCCTCCCGGTCATGTACTCCATCATTTGCTTCATGGGCCTGCTGGGCAACGGGCTGGTCATGCTGACCTACATCTACTTCAAGAGGCTCAAGACCATGACCGATACCTACCTGCTCAACCTGGCCGTGGCGGACATCCTCTTCCTCCTGACCCTTCCCTTCTGGGCGTACAGCGCGGCCAAGTCCTGGGTCTTCGGGGTCCACGTTTGCAAGCTCATCTTTGGCATCTACAAGATAAGCTTCTTCAGCGGCATGCTCCTGCTTCTGTGCATCAGCATCGACCGCTATGTCGCCATCGTCCAGGCCGTCTCGGCCCACCGCCACCGTGCCCGCGTCCTTCTCATCAGCAAGCTCTCTTGCGTGGGCATCTGGATGCTGGCCGTGGTGCTCTCCACCCCGGAGCTGCTGTACAGCGGCATCCAGAAGAGCAGCAGTGAGCAAGCGCTGCGGTGCTCCCTCATCACCGACCACGTGGAGGCCCTGATCACCATCCAGGTGGCCCAGATGGTGGTAGGCTTTCTGATCCCCCTGGTGGCCATGAGCTTCTGCTACCTCCTCATTGTCCGCACCCTGCTCCAGGCACGCAACTTCGAGCGCAACAAGGCCATCAAGGTGATCATTGCCGTGGTCGTGGTCTTCGTAGCCTTCCAGCTGCCCTACAACGGGGTGGTCCTGGCCCAGACGGTGGCCAACTTCAACATCACCAGCAGCACCAGCTGCGAACTCAGCAAGAAGCTCAACATCGCCTACGATGTCACCTACAGCCTGGCCTGCATCCGCTGCTGCGTCAACCCTTTCCTGTACGCCTTCATCGGCGTCAAGTTCCGCAGCGACCTCTTCAAGCTCTTCAAGGACCTAGGCTGCCTCAGCCAGGAGCGGCTCCGGCAGTGGTCCGCCTGCCGGCACGCCCGGCGGTCCTCCATGAGCGTGGAGGCTGAGACCACCACCACCTTCTCCCCGTAG

Related Sequences

bmy_13564T0 Protein

Length: 410 aa      View alignments
>bmy_13564T0
MLGAVPWAAGIHKSSSHSPPMITAACPKPGLSGLFMELCLPLFSLRALLNVCLCQDEVTDDYIGDNTTVDYTLYESVCFKKDVRNFKAWFLPVMYSIICFMGLLGNGLVMLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHVCKLIFGIYKISFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIWMLAVVLSTPELLYSGIQKSSSEQALRCSLITDHVEALITIQVAQMVVGFLIPLVAMSFCYLLIVRTLLQARNFERNKAIKVIIAVVVVFVAFQLPYNGVVLAQTVANFNITSSTSCELSKKLNIAYDVTYSLACIRCCVNPFLYAFIGVKFRSDLFKLFKDLGCLSQERLRQWSACRHARRSSMSVEAETTTTFSP*