Part of scaffold_888 (Scaffold)

For more information consult the page for scaffold_888 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THRA ENSTTRG00000016893 (Bottlenosed dolphin)

Gene Details

thyroid hormone receptor, alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016016, Bottlenosed dolphin)

Protein Percentage 51.65%
cDNA percentage 59.83%
Ka/Ks Ratio 0.65039 (Ka = 0.3673, Ks = 0.5648)

THRA ENSBTAG00000010745 (Cow)

Gene Details

thyroid hormone receptor alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014236, Cow)

Protein Percentage 54.14%
cDNA percentage 64.37%
Ka/Ks Ratio 0.69782 (Ka = 0.4756, Ks = 0.6815)

THRA  (Minke Whale)

Gene Details

thyroid hormone receptor, alpha

External Links

Gene match (Identifier: BACU007027, Minke Whale)

Protein Percentage 15.52%
cDNA percentage 34.37%
Ka/Ks Ratio 0.15048 (Ka = 1.7104, Ks = 11.366)

Genome Location

Sequence Coding sequence

Length: 873 bp    Location:76154..92014   Strand:+
>bmy_13551
GCCCCACCATGGCGCCGCCTTATCCCTGCCTCTTTCCTCTCTCTGCAGGGACCTCCGGACAGGACAAGATTCCGAAGCTACTCCCCCAGCCCAGGACCCCCCCACAGACCCGGCTTCCCCCCCAACCCCACTACCTGCCACTCCCTGGCCCCTCTCACCGCCCGCCCCCCTTGGGGCGCAGGGCATGGTGTGAAAGGCCAAGTGCTGAGACGGGCACCATGGGTGCTGGGCCCTAGGGCCTGGGTGGCGGGGGGTGGGCGGCCTGTGGGCGTGCCGGGGGGGCCAGTGTGCCCACCCCAGTCTCTTGGCGTGCTGGAGGGCATCCTGGATGGAATTAAAGTGAATGGAACAGAAGCCAAGCAAGGTGGAGTGTGGGTCAGACCCAGAGGAGAACAGTGCCAGGTCACCAGATGGAAAGCGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAACCAGCATGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGCGGGTCACTGGGCGTCCACCCGGAAGGACAGCAGCTTCTCGGAATGCATGTTGTTCAGGGTCCGCAGGTCCGGCAGCTTGAGCAGCAGCTTGGTGAAGCGGGAAGTCTCCGAGGGCCGGTTCTTCAGCACCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATGCCCGAGCGGTCTGTGGGGAAGACGACGGCAGTGAGGCAGGCTCCCTGAGCTCCTCTGACGAGGAGGACCCGGAGGCCTGCGAGGACGCGGCGTTGGCCATGCGGCCTCTCCCCGAAGCCCCTCAGAGGGCCGATGGGGAAGGAGGAGGAGGGGGAACGTGA

Related Sequences

bmy_13551T0 Protein

Length: 291 aa      View alignments
>bmy_13551T0
APPWRRLIPASFLSLQGPPDRTRFRSYSPSPGPPHRPGFPPNPTTCHSLAPLTARPPWGAGHGVKGQVLRRAPWVLGPRAWVAGGGRPVGVPGGPVCPPQSLGVLEGILDGIKVNGTEAKQGGVWVRPRGEQCQVTRWKAKKKERPMFPENQHEREVQSSILYKGAAAEGRPGGSLGVHPEGQQLLGMHVVQGPQVRQLEQQLGEAGSLRGPVLQHQSPKSPQQRLLELLHRSGILHARAVCGEDDGSEAGSLSSSDEEDPEACEDAALAMRPLPEAPQRADGEGGGGGT*