Part of scaffold_867 (Scaffold)

For more information consult the page for scaffold_867 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN8 ENSTTRG00000004844 (Bottlenosed dolphin)

Gene Details

tetraspanin 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004566, Bottlenosed dolphin)

Protein Percentage 74.47%
cDNA percentage 82.13%
Ka/Ks Ratio 0.70612 (Ka = 0.1922, Ks = 0.2722)

BT.59505 ENSBTAG00000019425 (Cow)

Gene Details

tetraspanin-8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025875, Cow)

Protein Percentage 63.45%
cDNA percentage 76.47%
Ka/Ks Ratio 0.92902 (Ka = 0.293, Ks = 0.3154)

TSPAN8  (Minke Whale)

Gene Details

tetraspanin 8

External Links

Gene match (Identifier: BACU016425, Minke Whale)

Protein Percentage 80.33%
cDNA percentage 84.52%
Ka/Ks Ratio 0.52727 (Ka = 0.1502, Ks = 0.2849)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 741 bp    Location:296669..267957   Strand:-
>bmy_13479
ATGGCAGGTGTGAGTGTCTGTGTAAAATATTCTATGTTTATCTTCARCTTCGTGTCCTGGCTATGTGGTGCCTCAATCCTGGCAGTAGCAATTTGGCTACGAGTAGGCAAAGATGGTCGAGAGATTCTCAGTCCTGGGGATGCTACCATTAACCCCTATATTGCTGTGAACATCTTGATTGTTGTGGGTGCTATCATCATGATTCTGGGTTTCCTGGGATGCTTTGGTGCCATGAAAGAAAACCAGTTCATGCTTGTTTTGTTTTTCGTAGGATTGATTCTGATCCTACTTCTGCAAGTGGTGGCAGGTATCCTAGGAGCTACTAACAAATCTAAGACTGAACGTGCTCTGAATGAGACTCTCCAGACTAATGTACATCTTTTGAGTGCAACAAATGAAAATGGAAAACTATTCCAGAAAGCCTTTTCTGAAATTCAAGAAGAGTTAAAATGTTGTGGTTTGATCAATGGAGCTTCTGATTGGGGAAATAATTTTCAATACTATTACAAGTCATGTGAATGTCCAAGTGCATCAGATTCTTCTTGTACGAAGTATGATGGAAAAACTATTTACAAACAGGTGAGAACAAATCAAATTTGGCACAGTACTTGGTCTGATATTTTCTATTGTCCTGTACTGCCAGATCAGGAAGAAATAAGTCTGTGGATGTGTCAAGTCATCATCGGACAAGAAGATCTGAATGCTGCCTTTCCAGCCATTGAATCTCTGGTACGTCTCTGA

Related Sequences

bmy_13479T0 Protein

Length: 247 aa      View alignments
>bmy_13479T0
MAGVSVCVKYSMFIFXFVSWLCGASILAVAIWLRVGKDGREILSPGDATINPYIAVNILIVVGAIIMILGFLGCFGAMKENQFMLVLFFVGLILILLLQVVAGILGATNKSKTERALNETLQTNVHLLSATNENGKLFQKAFSEIQEELKCCGLINGASDWGNNFQYYYKSCECPSASDSSCTKYDGKTIYKQVRTNQIWHSTWSDIFYCPVLPDQEEISLWMCQVIIGQEDLNAAFPAIESLVRL*