Part of scaffold_865 (Scaffold)

For more information consult the page for scaffold_865 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CRABP1 ENSTTRG00000015874 (Bottlenosed dolphin)

Gene Details

cellular retinoic acid binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015041, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.51%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0313)

CRABP1 ENSBTAG00000012909 (Cow)

Gene Details

Cellular retinoic acid-binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017158, Cow)

Protein Percentage 99.27%
cDNA percentage 96.84%
Ka/Ks Ratio 0.01568 (Ka = 0.003, Ks = 0.192)

CRABP1  (Minke Whale)

Gene Details

cellular retinoic acid binding protein 1

External Links

Gene match (Identifier: BACU004845, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.27%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0435)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 513 bp    Location:596093..602853   Strand:+
>bmy_13475
GCAGAGCCGCAGTCTCCGCTTTGCAGCTTGGAGTGTGCCCGCTGCGCCGCAGCTGTCCGTGCCTGCCGCCACCTTCCCGCCGCCGCCACCACTGCCAAGATGCCCAATTTCGCCGGCACCTGGAAGATGCGCAGCAGCGAGAATTTCGACGAGCTGCTCAAGGCGCTGGGTGTGAACGCCATGCTGAGGAAAGTGGCCGTGGCGGCTGCGTCCAAGCCGCACGTGGAGATCCGCCAGGACGGGGATCAGTTCTACATCAAGACATCCACCACGGTGCGCACGACTGAGATCAACTTCAAGGTCGGAGAAGGCTTTGAGGAGGAGACAGTGGACGGACGCAAGTGCAGGAGTTTAGCCACTTGGGAGAATGAGAACAAGATCCACTGCACACAAACTCTCCTCGAGGGGGACGGCCCCAAAACCTACTGGACCCGCGAGCTGGCCAACGACGAGCTCATCCTGACGTTCGGCGCCGATGATGTGGTCTGCACGAGGATTTATGTTCGGGAGTGA

Related Sequences

bmy_13475T0 Protein

Length: 171 aa      View alignments
>bmy_13475T0
AEPQSPLCSLECARCAAAVRACRHLPAAATTAKMPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE*