Part of scaffold_863 (Scaffold)

For more information consult the page for scaffold_863 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPRC ENSTTRG00000008507 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, receptor type, C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008091, Bottlenosed dolphin)

Protein Percentage 81.22%
cDNA percentage 85.12%
Ka/Ks Ratio 0.56712 (Ka = 0.0791, Ks = 0.1395)

PTPRC ENSBTAG00000023144 (Cow)

Gene Details

receptor-type tyrosine-protein phosphatase C precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013320, Cow)

Protein Percentage 73.94%
cDNA percentage 79.25%
Ka/Ks Ratio 0.35519 (Ka = 0.1791, Ks = 0.5044)

PTPRC  (Minke Whale)

Gene Details

protein tyrosine phosphatase, receptor type, C

External Links

Gene match (Identifier: BACU001705, Minke Whale)

Protein Percentage 91.51%
cDNA percentage 94.31%
Ka/Ks Ratio 0.81318 (Ka = 0.0551, Ks = 0.0677)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3780 bp    Location:325673..407951   Strand:+
>bmy_13434
GTCACTAAATCTTATGAGAAGCATGATTCCAGAACTGTGCCACTGACGAGAATATCATTCCTGCTTCAAAATGGAGGATTACACCTCAAACTCGAGGTTATGGATGCTCTTTTTGCTGCAGGAGCTCATTGTCTTATCAGCCGGCTTCACCATAAACTAGAGAAGTTGTGGTTTCACTCCGAGATGGGGCTGCTGCGGCCGCTGCCATGGCAACCCGCTGCACCATTTGCAAAGGCTTGTGCGCTTAACCGCACCAGCTACACCTCTTCCTTTCCTATAAAGACTCAGAAAAAGAAAAACAGAAGTACCCCGAGGAGGAGAAACCACAAGAGCAGAAAAGCCACCAAGGCTGCTCTGAGCTGTGCAAACAGCCGTCTGGCGAGGAGAGCGTTTTTAAAGCATGCCCGTAATAACGAGAATTCAAAAACTAATAACATAGTTTTGACATACTTGGGCTTTGTAAGCACGATATTAAGAGAAGGACTATGGTTTCACCGGGGACAAGACACCGTTCCTTCCACTCAAGGTCATCCCTTACCTGCTCACACCACTGCATTCTCACTCGCAAGCATCTCTGAACGAGGAAATGACTCCTCAGAGACCACGCCTCCTCCTGGTCCAGAAAGTAGCACCACCGAAGTATCCCTGAACTCTTGGGATAATGATAGTATTCCTGCTGTGACAGGGGCTCCAAGAGAGAGGACTGCACCCAGCACCTTGCCCGCAGACACAGCGTTCCCACCAGTAACCACGCTCAGCCCTGCACRCAGCAGTCAYGCTGCCTCACCTGCACACATCTCCAACTCGACCACCCAAGACAATGCCTCAGATGTGCTCAACGTGTCCACTACACCATCCTCTCTGACCCCTGCAAAAACCATTATCTCTACAACTGATCTTCCAACAATAGCTCCTCTTACTACACAAGAAAAATATGCAGACATCTCTGTGCACTGCTCTCATAACAAGGAAAGTGACACGTATAATGCAACACTTAGTGAAGTGACATGTGAATCTCCTGGGCGTGAAGTGCAGCTCCATGACCTACAGGAATGTGAAAAGARGAAGATCAATATAWCASATGCTTCATGTTACCCTCCATTTGAATATTTATTAGAGGTACCACCAGATCCTAAACATTTTCAGCTGAATGAGTGTGTAGAACCTGAAAAGGCAAATRCTTCTCTTTGTTTACATTGGGAAATCACTAAAAATTTTACTTGTGATAAAAAGAAAATAACATATAAATTTGAATGTGATCCAGGAATCCCTCAGAATATGAGTTGTGCTAACTTCAGTGCACGTAAAGGATGGGTTACCTGGGGACCACCGGCAAATTTTTTTCATACGTTCACTCTTTGTTATCAGAATGCTTCAGAGGGAAGATGCCACACTCTGAATAAAACTACAAACACAATCCATTTGGAATATTTGAAACCTTTTACAAGGTATGAGATAACATTACATGCCTCTGTCAATGGAAGAGTGGAACGTCCAAGCGAGGTCACGGACTTAAATGTTTCAAGGAGGACAGATAATAGTATGGCTGTCTATTATAACAATGGGATATATTCTGGTCATCCAAAAATTGTTTCACAATCAACATCTTATAATTCTAAAGCACTGATCATATTTTTGGTATTTCTGATTATTGTGACATCAATAGCCCTGCTTATTGTTCTCTATAAAATCTATGATCTGCAAAAGAAAAGATCCAGCAATTTAGATGAACAGCAGGAACTTGTTGAAAGGGATGATGAGAGGCAACTGATGAATGTGGAGCCCATCCATGCAGATGTTTTGTTGGAAACTTACAAGAGAAAGATCGCTGATGAAGGGAGGCTCTTCCTGGCTGAATTCCAGAGCATTCCAAGGGTATTCGGCAAGTTTTCTATCAAGGATGCTCGAAAACCCTTTAACCAGAATAAAAACCGCTACGTTGACATCCTTCCTTATGATTATAACCGTGTTGAACTCTCTGACATAAACGGAGATGCAGGGTCCAACTATATCAATGCCAGCTATATTGATGGTTTCAAAGAACCCAGGAAATACATTGCTGCACAAGGTCCCAGGGATGAAACTGTTGATGATTTCTGGAGGATGATCTGGGAACAGAAAGCCACGGTTATTGTCATGGTCACTCGATGTGAAGAAGGGAACAAGAACAAGTGTGCATTATACTGGCCGTCGATGGAAGAGGGCAGCCGGGTTTTTGGAGATGTGATTGTAGAGATCAATGAGCACAAAAGATGCCCGGATTACATCATTCAGAAGTTGACCATTGCAAATAGAAAAGAAAAAGCAACTGGGAGAGCAGTGACCCACATTCAGTTCACCAGCTGGCCAGACCATGGGGTCCCCGAAGACCCTCACCTGCTCCTCAAGCTGCGCAGGAGAGTGAACGCTTTCAGCAACTTCTTCAGTGGCCCCGTCGTGGTGCACTGCAGTGCTGGTGTTGGACGCACAGGCACCTATATTGGAATTGATGCCATGTTAGAAGGCCTGGAGGCAGAGAGCAAGGTGGATGTCTATGGCTATGTCGTCAAGCTAAGGCGACAGAGGTGCCTGATGGTTCAGGTGGAGGCACAGTACATCTTGATCCATCAGGCCTTGGTGGAATACAATCAGTTTGGAGAAACAGAAGTGAGCTTGTCTGAGTTACATCCATATCTGTCTAACATGAAGAAAAGAGATCCACCCAGTGAGCCTTCCCCACTGGAGGCTGAATTCCAGAGACTTCCTTCATATAGGAGCTGGAGGATACAGCACATTGGGAATCAAGAAGAAAATAAGAATGACTTTAACAGAGTAACACTTAAACATGAACTGGAGATGAGCAAAGAGAGTGAGCACGACTCAGATGAGTCCTCTGACGATGAGAGTGACTCGGAGGAGACGAGCAAATACATCAATGCCTCCTTTGTAATGAGTTATTGGAAACCTGAAGTGATGATTGCAGCTCAGGGACCACTGAAAGAGACCATTGGTGACTTTTGGCAAATGATATTCCAAAGAAAAGTCAAGGTGATTGTTATGCTGACAGAGCTAAAGAATGGAGACCAGGAAGCCTGTTCTCAGTACTGGGAGGAAGGAAAGCAAACATATGGAGACGTAGAAGTTCATATGAAGGACACCAATAAATCTTCAGCCTATACCATCCGTGCATTTGAACTGAGACATTCCAAGAGGAAAGATCCACGAACTGTGTACCAGTACCAATTTAATAACTGGAATGGGGAAGAACTGCCCGTGGAGCCCAAAGAATTAATCTCAATGATTCAGAATCTCAAACAGAAACTTCCCAAGAAGAACTCCACCGAAGGGAATAAGTTTCACAGGAATGTGCCTCTCCTCATTCACTGCAGAGATGGATCTCAGCAAACAGGAATATTTTGTGCTTTGTTAAATCTCTTGGAAAGCGCAGAAACAGAAGAGGTGATAGATGTTTTTCAAGCAGTAAAATCTCTACGCAAAGCTAGGCCGGGAATGGTTCCCACATTCGAGCAATACCAATTCCTGTATGACGTCATTGCTAGCATCTGCCCTGCCCAGAACGGGCAGGTGAAGAAAAACAACCAACAAGAAGATAAAATTGAATTTGATAATGAAGTGGACAAAGCAAAGCAGGATGCCAACTGTGTGAGCCCACCTGGTGCCCTGGATAAGACCCCTGAAGGAAATAAAGAGGATGAAAGTTCCAAACCCGCAAGTGGCCCTGAGGGGCCAGAACATTCCGCCAATGGTCCAGCGAGCCCAGTTTTAACTCAAAGTGCATAG

Related Sequences

bmy_13434T0 Protein

Length: 1260 aa      View alignments
>bmy_13434T0
VTKSYEKHDSRTVPLTRISFLLQNGGLHLKLEVMDALFAAGAHCLISRLHHKLEKLWFHSEMGLLRPLPWQPAAPFAKACALNRTSYTSSFPIKTQKKKNRSTPRRRNHKSRKATKAALSCANSRLARRAFLKHARNNENSKTNNIVLTYLGFVSTILREGLWFHRGQDTVPSTQGHPLPAHTTAFSLASISERGNDSSETTPPPGPESSTTEVSLNSWDNDSIPAVTGAPRERTAPSTLPADTAFPPVTTLSPAXSSHAASPAHISNSTTQDNASDVLNVSTTPSSLTPAKTIISTTDLPTIAPLTTQEKYADISVHCSHNKESDTYNATLSEVTCESPGREVQLHDLQECEKXKINIXXASCYPPFEYLLEVPPDPKHFQLNECVEPEKANXSLCLHWEITKNFTCDKKKITYKFECDPGIPQNMSCANFSARKGWVTWGPPANFFHTFTLCYQNASEGRCHTLNKTTNTIHLEYLKPFTRYEITLHASVNGRVERPSEVTDLNVSRRTDNSMAVYYNNGIYSGHPKIVSQSTSYNSKALIIFLVFLIIVTSIALLIVLYKIYDLQKKRSSNLDEQQELVERDDERQLMNVEPIHADVLLETYKRKIADEGRLFLAEFQSIPRVFGKFSIKDARKPFNQNKNRYVDILPYDYNRVELSDINGDAGSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRMIWEQKATVIVMVTRCEEGNKNKCALYWPSMEEGSRVFGDVIVEINEHKRCPDYIIQKLTIANRKEKATGRAVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFSGPVVVHCSAGVGRTGTYIGIDAMLEGLEAESKVDVYGYVVKLRRQRCLMVQVEAQYILIHQALVEYNQFGETEVSLSELHPYLSNMKKRDPPSEPSPLEAEFQRLPSYRSWRIQHIGNQEENKNDFNRVTLKHELEMSKESEHDSDESSDDESDSEETSKYINASFVMSYWKPEVMIAAQGPLKETIGDFWQMIFQRKVKVIVMLTELKNGDQEACSQYWEEGKQTYGDVEVHMKDTNKSSAYTIRAFELRHSKRKDPRTVYQYQFNNWNGEELPVEPKELISMIQNLKQKLPKKNSTEGNKFHRNVPLLIHCRDGSQQTGIFCALLNLLESAETEEVIDVFQAVKSLRKARPGMVPTFEQYQFLYDVIASICPAQNGQVKKNNQQEDKIEFDNEVDKAKQDANCVSPPGALDKTPEGNKEDESSKPASGPEGPEHSANGPASPVLTQSA*