Part of scaffold_856 (Scaffold)

For more information consult the page for scaffold_856 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CKAP4 ENSTTRG00000007590 (Bottlenosed dolphin)

Gene Details

cytoskeleton-associated protein 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007179, Bottlenosed dolphin)

Protein Percentage 92.89%
cDNA percentage 95.39%
Ka/Ks Ratio 0.31344 (Ka = 0.0359, Ks = 0.1146)

CKAP4 ENSBTAG00000011913 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015804, Cow)

Protein Percentage 91.14%
cDNA percentage 91.08%
Ka/Ks Ratio 0.11158 (Ka = 0.0431, Ks = 0.386)

CKAP4  (Minke Whale)

Gene Details

cytoskeleton-associated protein 4

External Links

Gene match (Identifier: BACU000903, Minke Whale)

Protein Percentage 95.31%
cDNA percentage 96.21%
Ka/Ks Ratio 0.2696 (Ka = 0.027, Ks = 0.1)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1605 bp    Location:541613..506124   Strand:-
>bmy_13426
ATGGAAAGGAATAGATTTGCAAAAGGCCCTTCACTAAGGCTCGGACGGGTGCTCAACTTTCTCTTCTACCTCGCCCTGGTGGCGGTGGCCGCCTTCTCGGGCTGGTGTGTCCACCACGTCCTGGAGGAGGTCCAGCAGGTCCGGCGAAGCCACCAGGACTTCTCCCGGCAGAGGGAGGAGCTGGGTCAGGGCTTGCAGGGCGTCGAGCAGAAGGTGCAGTCTCTGCAAGCCACGTTCGGGACTTTTGAGTCCTTCGTGAGAAGCTCCCAACATAAACAAGATCTCACAGAGAAAGCCGTGAAGCAAGGGGAGAGCGAAATCAACCGCATCAGTGAAGTTCTACAAAAACTCCAGAATGAGATCCTCAAAGACCTCTCGGATGGGATCCACGTGGTCAAGGACGCCCGGGAGCGGGACTTCACGTCCCTGGAGAACACGGTGGAGGAAAGGCTGACCGAGCTCACCAAGTCCATCAACGACAACATCGCCATCTTCACCGAGGTCCAGAAGAGGAGCCAGAAGGAAATAAACGACGTGAAGGCCAAGGTCGCCTCTCTGGAAGACTCGGAGGGATACAAGCAGGATTTGAAAGTCTTGAAGGAAGCGGTGAAGGAAATACAAACCTCGGTGAAGTCCAAAGAGAAGGACATTGAGGCCCTGAGAAGCACAGTCCAGACCATGGAGTCTGATGTCTACACGGAGGTCAAAGAGCTGGTGAGCCTCAAACAGGAGCAGCAGAGGTTGAAGGAGGCGGCCGATTCGGAGCACCACACCCTGCAGGCGCTCATGGAGAAGGTCCTCCGGGCGGAGGAGGCGGCCGCCCGCCTCCCCGACGAGATCCGGGGACTCATGGAGAAGGTCCTCCGGGCGGAGAAGGCGGCCGCCCGCCTCCCCGACGAGATCCGGGGACTCGAGGAGGAGCTCGGCCAGCTCAAGGCCGCAGCCCTCAGGCCGGAAGAAGACGGGGTCTTCAGACCCTCCGAGGCCTTCGAAACGCTCCAGAAGGAGAGCCAGGCCTTGGACTCGCGGCTGCAGAGCGTGGAAGATGGGGTGCAGGCGGCGCGGGCGGCTTGGGAGCACCACCGCGAGACGCTGGAGGCGCTGCGCGCGCAGAGCGAGGAGCAGGCGCAGCACCTGGCGGACCTGCAGGAGCGCGTGGCTGGCCTGGGCCCCGCCCCCGACGCAGACGTTGACGCGGACGCCGGCGGCCTGGCGGGCGGGGTGCGCGGCCTCGGTGAGGCCCAGCTCTCCCTGGTGGGAGATGTGGACGAACTGAAGCGTCGCGTGGCCGAGCTTCCCGGCGCCGTGGAGGCGCTGCAGAAGGTCCAGGAGCAGGTCCGCACACTGCTCAGCCGCGACGCCGCCGCGCCCCCCCAGGACCTGCTGGACAGACTCTCCTCTCTGGACAACCTCAGAGCCTCCGTGGGCCAGGTGGAGTCGGACTTGAAAATGCTCAGGACTGCCGTGGACAGTTTGGTCGCGTACTCAGTGAAGATTGAGACCAACGAGAACAACTTGGAGTCAGCCAGAAGTTTGCTAGAGGACCTGAGGAATGACCTGGATAGGTTGTTTGTGAAAGTGGAAAAGATTCACGAGAAAGTCTAA

Related Sequences

bmy_13426T0 Protein

Length: 535 aa      View alignments
>bmy_13426T0
MERNRFAKGPSLRLGRVLNFLFYLALVAVAAFSGWCVHHVLEEVQQVRRSHQDFSRQREELGQGLQGVEQKVQSLQATFGTFESFVRSSQHKQDLTEKAVKQGESEINRISEVLQKLQNEILKDLSDGIHVVKDARERDFTSLENTVEERLTELTKSINDNIAIFTEVQKRSQKEINDVKAKVASLEDSEGYKQDLKVLKEAVKEIQTSVKSKEKDIEALRSTVQTMESDVYTEVKELVSLKQEQQRLKEAADSEHHTLQALMEKVLRAEEAAARLPDEIRGLMEKVLRAEKAAARLPDEIRGLEEELGQLKAAALRPEEDGVFRPSEAFETLQKESQALDSRLQSVEDGVQAARAAWEHHRETLEALRAQSEEQAQHLADLQERVAGLGPAPDADVDADAGGLAGGVRGLGEAQLSLVGDVDELKRRVAELPGAVEALQKVQEQVRTLLSRDAAAPPQDLLDRLSSLDNLRASVGQVESDLKMLRTAVDSLVAYSVKIETNENNLESARSLLEDLRNDLDRLFVKVEKIHEKV*