Part of scaffold_860 (Scaffold)

For more information consult the page for scaffold_860 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTCD2 ENSTTRG00000011851 (Bottlenosed dolphin)

Gene Details

pentatricopeptide repeat domain 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011239, Bottlenosed dolphin)

Protein Percentage 96.52%
cDNA percentage 97.1%
Ka/Ks Ratio 0.24728 (Ka = 0.0164, Ks = 0.0664)

PTCD2 ENSBTAG00000014675 (Cow)

Gene Details

Pentatricopeptide repeat-containing protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019535, Cow)

Protein Percentage 91.91%
cDNA percentage 93.26%
Ka/Ks Ratio 0.34346 (Ka = 0.0466, Ks = 0.1358)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1041 bp    Location:393780..421906   Strand:+
>bmy_13420
GCTAAAAGATACCTACTTACAGATAATATTGTGAAATTAAAGGACTTTCAGCATAAGAAGGTGGCCGTTGCATGTAATCTTCCTGGCACCAAAGAAACCTATTTGAGGAACTTGGAAGAGAAACTGACCCAGAGTAAGCTCATCTTGAAAGAGGAGTTGAGAACCTTACTTCATTTGTGTGAGTCCTGGGACGATGTGGAGCTGGCTAAAAATGTCATTTACAGGTACCATGCAGAGAACAGGAATATCACTTTGGGGGAGTACAAGTTTGGACCACTTTTCATGAGGTTGTGCTACGAGTTGGATCTTGAGGAATCTGCAGTGGAGCTCATCAAAGACCAGCATTTACGAGGTTTCTTCTCAGACTCCACATCATTCAATATTTTGATGGATATGTTATTTATCAAAGGTAAATATAAAAGTGCATTGGAAGTACTGATTGAGATGAAAAACCAAGATGTGAAGTTCAACAAAGATACTTACGTCCTTGCTTTTGCAATTTGCTACAAACTGAATAGCCCTGAATCTTTTACAATCTGTACCACGTTAAGAGAAGAAGCCCTCATCAAAGGAGAAATCCTCTCCAGGAGAGCATCCTGTTTTGCAGTGGCATTAGCTCTGAACCAGAACCAGCTGGCAAAAGCTATATCCATTTTTTCGCAAATCATGAAGCCAGAAAGCATAATCTGCACTAATTTAAATATTATGATCCATATCCAGTCAAATATGTTGAAAACCCTAATAGATACACTAAAGGATGCTACAGAGGGAAATCTATCAAGATTTGTGAAAAAACATGTGTTCTCAGAAGAAGTGCTGGTCAAAGTGAGGGAAAAAGTGCAGGATGTGCCTGCTCTTCTGGCCACATTTGATGAGCTGTATGAGAAACTGCACATACATGGCCAGGTCACCACGTACACTTTGGATGCTCTGCTCTGCCACACCCCCAGTGACAGGAAATCCCACACGGTGCTACTAAACAAGAGGACAGTCAGCCGTCGGACCTTCCAGCCGCTCAGCCAGTCCCTGTGGGCTGAGTAA

Related Sequences

bmy_13420T0 Protein

Length: 347 aa      View alignments
>bmy_13420T0
AKRYLLTDNIVKLKDFQHKKVAVACNLPGTKETYLRNLEEKLTQSKLILKEELRTLLHLCESWDDVELAKNVIYRYHAENRNITLGEYKFGPLFMRLCYELDLEESAVELIKDQHLRGFFSDSTSFNILMDMLFIKGKYKSALEVLIEMKNQDVKFNKDTYVLAFAICYKLNSPESFTICTTLREEALIKGEILSRRASCFAVALALNQNQLAKAISIFSQIMKPESIICTNLNIMIHIQSNMLKTLIDTLKDATEGNLSRFVKKHVFSEEVLVKVREKVQDVPALLATFDELYEKLHIHGQVTTYTLDALLCHTPSDRKSHTVLLNKRTVSRRTFQPLSQSLWAE*