Part of scaffold_849 (Scaffold)

For more information consult the page for scaffold_849 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHPF ENSTTRG00000011697 (Bottlenosed dolphin)

Gene Details

chondroitin polymerizing factor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011093, Bottlenosed dolphin)

Protein Percentage 99.35%
cDNA percentage 98.84%
Ka/Ks Ratio 0.07028 (Ka = 0.0029, Ks = 0.0408)

CHPF ENSBTAG00000020539 (Cow)

Gene Details

chondroitin sulfate synthase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027366, Cow)

Protein Percentage 96.9%
cDNA percentage 94.24%
Ka/Ks Ratio 0.0634 (Ka = 0.0147, Ks = 0.232)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2487 bp    Location:713559..708744   Strand:-
>bmy_13390
GAACGCGGCGCAGGGGATTCGGCTCGGCGGGGAGGGAGGGGGGCCCGCCCGCTTGGCTCGGGCCCTCCGGATCCGCCCCCTCCCCGGTCCCGCCCCCTCGAAGCCTCCTCTTGCTGCTCTGGGGCTGCTCCAGGGCCGGGGGCCCGCGGTCCGGGCGCCATGCGGGCATCGCTGCTGTTGTCGGTGCTGCGGCCCGCAGGGCCCGTGGCCGTGGGCATCTCCCTGGGCTTCACTCTGAGCCTGCTCAGCGTCACCTGGGTGGAGGAGCCTTGTGGCCCAGGGCCGCCCCAACCCGGAGATTCTGAGCTGCCGCCGCGCGGCAACACCAACGCGGCGCGCCGGCCCAACTCGGTGCAGCCCGGAGCGGAGCGCGAGAGGCCCGGGGCCGGTGCAGGCGCCGGGGAGAACTGGGAGCCGCGTGTCTTACCCTACCACCCCGCACAGCCTGGCCAGGCCGCCAAAAAGGCCGTCAGGACCCGCTACATCAGCACAGAGCTGGGCATCAGGCAGAGGCTGCTCGTGGCGGTGCTGACCTCACAGGCCACGTTGCCCACACTGGGCGTGGCTGTGAACCGCACGCTGGGGCACCGGCTAGAGCGTGTGGTGTTCCTGACAGGCTCGCGGGGCCGCCGGGCACCACCGGGGATGGCCGTGGTGACGCTAGGCGAGGAGCGGCCCATCGGGCACCTGCACCTGGCACTGCGCCACCTGCTGGAGCAGCACGGCAACGACTTTGACTGGTTCTTCCTAGTGCCCGATGCCACCTACACCGAGGCGCACGGACTGGCTCGCCTAGCTGGCCACCTCAGCCTGGCAGCCGCTGCCCACCTCTATCTGGGCCGGCCCCAGGACTTCATCAGTGGAGAGCCCGCCCCAGGCCGCTACTGCCACGGTGGCTTTGGGGTGCTGCTGTCACGCACACTGCTGCAGCAGCTGCGCCCCCACCTGGAAGCCTGCCGCAACGACATCGTCAGTGCGCACCCGGATGAGTGGCTGGGCCGCTGCATCCTCGATGCCACCGGGGTGGGCTGCACTGGTGGCCACGAGGGAGTCCACTATAGCTACCTGGAGCTGAGCCCTGGGGAGCCCGTGCAGGAGGGGGACCCTCGTTTCCGCAGTGCCCTGACAGCTCACCCTGTCCGTGACCCTGTGCACATGTACCAGCTGCACAAGGCTTTTGCCCGAGCTGAACTGGAACGCACATACCAGGAGATCCAGGAGTTACAGTGGGAGATCCAGAACACCAGCCGTCTGGCAGCGGATGGGGAGCGGGCAGCCACCTGGCCCGTGGGCATTCCAGCGCCGTCCCGCCCGGCCTCCCGCTTTGAGGTGCTGCGCTGGGACTATTTCACAGAGCAGCATGCTTTCTCCTGCGCTGATGGCTCGCCCCGCTGCCCACTGCGTGGGGCTGACCAGGCTGATGTGGCCGATGTTCTGGGGGCAGCCCTGGAGGAGCTCAACCGCCGGTACCACCCGGCCCTGCGGCTCCAGAAGCAGCAGCTGGTTAATGGCTACCGACGCTTCGATCCTGCCCGGGGTATGGAGTACACGCTGGACTTGCAGCTGGAGGCATTGACCCCCCAGGGTGGCCGCCGGCCCCTCACCCGCCGAGTGCAGCTGCTACGGCCACTGAGTCGCGTGGAGATCTTGCCCGTGCCCTATGTCACCGAGGCCTCGCGTCTCACCGTGTTACTGCCACTGGCTGCAGCCGAGTGTGACCTGGCCCCTGGCTTCCTGGAGGCCTTCGCCGTGGCCGCACTGGAGCCTGGCGATTCTGCGGCCACCCTGACCCTGCTGCTACTGTATGAGCCACGACAGGCCCAGCGGGCGGCCCACGCCGATGTCTTTGCACCTGTCAAGGCCCGTGTGGCAGAGCTGGAGCGGCGTTTCCCCGGTGCCCGGGTGCCCTGGCTCAGCGTGCAGACAGCCACACCCTCACCGCTGCGCCTCATGGATCTGCTCTCCAAGAAGCACCCACTGGACACGCTGTTCCTGCTGGCCGGGCCAGACACGGTGCTCACCCCGGACTTCCTGAACCGCTGCCGCATGCATGCCATCTCTGGCTGGCAAGCCTTCTTTCCCATGCACTTCCAGGCCTTCCACCCGGCCGTCGCCCCACCCCAGGGCCCGGGACCCCCTGAATTAGGCCGAGACACAGGCCGCTTTGATCGCCAGGCGGCCAGCGAGGCCTGCTTCTACAACTCCGACTACGTGGCGGCCCGAGCGCGGCTGGCGGCGGCCTCGGAGCAGGAGGAGGAGCTGCTGGAGAGCCTGGATGTGTATGAGCTGTTCCTGCGCTTCTCCAGCCTGCACGTGCTGCGGGCGGTGGAGCCCGCGCTGCTGCAGCGCTATCGGGCCCAGACGTGTAGCGCGCGGCTTAGCGAGGACCTGTACCACCGCTGCCGCCAGAGTGCGCTCGAGAGCCTCGGCTCCCGCACCCAGCTGGCCATGCTGCTCTTCGAGCAGGAGCAGGGCAACAGCACCTGA

Related Sequences

bmy_13390T0 Protein

Length: 829 aa      View alignments
>bmy_13390T0
ERGAGDSARRGGRGARPLGSGPPDPPPPRSRPLEASSCCSGAAPGPGARGPGAMRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAARRPNSVQPGAERERPGAGAGAGENWEPRVLPYHPAQPGQAAKKAVRTRYISTELGIRQRLLVAVLTSQATLPTLGVAVNRTLGHRLERVVFLTGSRGRRAPPGMAVVTLGEERPIGHLHLALRHLLEQHGNDFDWFFLVPDATYTEAHGLARLAGHLSLAAAAHLYLGRPQDFISGEPAPGRYCHGGFGVLLSRTLLQQLRPHLEACRNDIVSAHPDEWLGRCILDATGVGCTGGHEGVHYSYLELSPGEPVQEGDPRFRSALTAHPVRDPVHMYQLHKAFARAELERTYQEIQELQWEIQNTSRLAADGERAATWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADQADVADVLGAALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAAAECDLAPGFLEAFAVAALEPGDSAATLTLLLLYEPRQAQRAAHADVFAPVKARVAELERRFPGARVPWLSVQTATPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRDTGRFDRQAASEACFYNSDYVAARARLAAASEQEEELLESLDVYELFLRFSSLHVLRAVEPALLQRYRAQTCSARLSEDLYHRCRQSALESLGSRTQLAMLLFEQEQGNST*