Part of scaffold_849 (Scaffold)

For more information consult the page for scaffold_849 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC108 ENSTTRG00000010011 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 108

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009500, Bottlenosed dolphin)

Protein Percentage 83.44%
cDNA percentage 85.04%
Ka/Ks Ratio 0.33511 (Ka = 0.0215, Ks = 0.0641)

CCDC108 ENSBTAG00000026751 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013615, Cow)

Protein Percentage 82.35%
cDNA percentage 86.55%
Ka/Ks Ratio 0.26554 (Ka = 0.106, Ks = 0.3992)

CCDC108  (Minke Whale)

Gene Details

coiled-coil domain containing 108

External Links

Gene match (Identifier: BACU012718, Minke Whale)

Protein Percentage 98.27%
cDNA percentage 98.75%
Ka/Ks Ratio 0.24263 (Ka = 0.0081, Ks = 0.0333)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5484 bp    Location:285339..243528   Strand:-
>bmy_13368
ATGCTCATCAGGGCAGCCCTAAGCCTCCTCATGAGGACTAGGGACAGCGGGGACTACACCATGAACTCCGGATCATGCCTGAGTGCCAGCACAATGGCCTTTCCCACCATCACTGGCGGCAGTGTGGCCATGAGTGCCTACAGCAGCAGCAATGCTAGTGCCTGTGTGAGGACACGTGCGGGGCAGGTGGAGTGGGCGGAGCAGGGCCAAGCGGGACAGCCTGACAGTTCCGTGGATACTCAGAAGTGCTTCCCAAAGAAGCAGGACAAAGTGAAGAAGAGGGTCATCTGGGGCATTGAGGTGGCTGAGGAGCTTCAGTGGAAAGGCTGGGAGCTGGGGAAGGAGATCACCAAGAACCTGGTTCTGAAAAATCTATCCTTGAAAATCCAGAAGATAAAGTACAGGCCCCCCAAGACCAAATTCTTCTTCACGGTCATCCCCCAGCCCATCTTCCTGAGCCCAGGCATAACCCTCTCACTCCCAATCATCTTCCGGCCCCTGGAGGAGAAGGAGTGCGTGGACCAGCTGTGGTTTGAGAAAGCAGAGGGGATGTTCTGTGTGGACCTGAGAGCCGCCCTGCCCTGCCACAATCTGATCTGCCCACCGTCCCTGCAGTTGCCCATGTGCGCCATGGGGGACATGGCTGAGGCCTGGTTCTGCCTGGACAATGCGGGGGACCTGCCCACCTTCTTCACCTGGGAGTCCCCCAGCCCATTCCAGATGTTGCCGACCACGGGGCTGCTGGAGCCAGGCCAGGCCTGCCGGATCAAGGTGACCTTTCAGCCCCTTATGGCTATCATCTATGACGTTCAGGCCACGTGCTGGTACGGGGAGGGAAGCAAGCAGAAGAGCAGCATCCAGCTGCAGGCTGTGGCCAAATGCGCCCAGCTGCTGGTGAGCATAAAGCAGAAGCGCCCGGAGGACCAGGATGCCGAGGGCGTCCAGAAAGTATTGCACTTTGGCTCTGTTGCCGTGGGCTGCACCGCTGAGAGGCAGATCAAGCTGATAGAAGTGGCCCCAGACATGCTGGCCAAAGACGAGGCCTTCTCTTGCCCCACGGCCCATGGCATCGTGCCCCCAGGAGAGAAGAAATGCGTGTCAGTGTTCTTCCACCCCGAGACCTTGGACGTCAAGACTATGGACTACTTGTCCATCATGCCCTCTGGCTGTGCCTCCCAAACCCTGCTCAAAGTCGTTGGTTTCTGTAGAGGTCCTGACGTGTCCCTGCAGTACTACTGTGTCGACTTCAGCTGGGTCAACCTTGGGAAGCGCTCGGAGCAGTCCCTGTGGATTGAGAACAAGTCGGACTGCACGGCCCACTTCCAGTTTGACATCGACTGTCAGGAGAGCGTCTTCAGCATCAGACCTGCCTTTGGGACCCTGGTGGGCAAGGCCCGCATGACCCTGCACTGTGCCTTCCAGCCCACTCACCCCATCATCTACTTTCGGAGGGTGGCCTGTTTCATCCACCACCAGCACCTCGCTTGGTACCGCACACACCTGGTGCGGGGCCTGACGCTTTACCCGCCTGACATCCTGGGCATCATGCTGAGGGAGAAGAAGCTGGAGCGGGATAAGAACGGTGCCCTGATGATTCCCACTGAGGACCTGGAGGACAAACCAGCCCCACAGTATCCCCTCATCCCCCCCATGACCGAGTACTTCTTCGACGGCACCAACGACATGGCCATCTTTCCCCCGCCCGTCAGTATTGAGCCTGTCGAGGTGGATTTTGGTGCTTGCCCCAGGCCCAAGGACCCCAACCCTGTCCCCCTGTGCCTGATGAACTACACCAAAGGCAAGATCACTGTGGCCTGGACACGCAGGGCTGATTGCCCCTTCTGGGTGACTCCAAACCCCTGCGATGTGCCCCCTCTCAAGTCCACGGCCATGCGCTTGCACTTCCAGCCGCCTCACCCCAACTGCCTATACGCCGTGGAGCTTGAAGCCTTTGCTGTCTATAAGGTCCTGCGGAGCTACAACAATATCGAAGAGGACTGCACTGTGTGCCCGTCCTGGTGCCTGAGGCTCCGGGCACGAGGCCACAGCTATTGTGCTGGCTTGGAGCACCACATCCCTCAGTATACCCTGGATGCCCCCAAGCTATTTCCTGCAGTGTCCCCCAGCGAACCCTCCTACCGCAGCCTGCTCCTGATCAACAAAGGCTCCATGCTGCTGACCTTCAACCTGGCCCCCAGAAGCAGCTCGGACGTCTCCCTACGGCCCAGCTCGGGCCTCGTGCCCCCTGGGGCCCACCAGATCTTCCTCATCTCTACCTACCCCAAGGGCACCTCCTGGAAGCAGCATGTGTTCTACTTGCAGTTCAATTTCTGCCCCCAGTATCTCAAGGAGGTAAGCATGCAGAGCCGGGAGGAGCCGCTGCAGCTGAAGCTGGACACCTGTAAAAGCGTCTTCTTCAAGCCCACCTGGGTGGGTTGCTCCTCCACCAGCCTCTTCACCTTCCAAAACCCCTCACGTCTACCTCTGGAGTTTGAGTGGAGGGTCTCCCAGCAGCACCGGAAGATGCTGGCCGTCCAGCCCACCAGGGGGATTATCCAGCCCAATGAGAGCCTTACGCTGACGTGGACCTTCAGCCCTCTGGAGGAGACCAAGTACCTGTTCCGAGTGGGGATGTGGGTCTGGGAAGCTGGCCTGCCCCCAAACACTAAGCCCTCCGCCACCACCCACTACATGCTCCGGCTGGTGGGCATGGGCATCACCAGCAGCCTCTCCGCAAAGGAAAAGGAGCTGGACTTTGGGAACGTGCTGGTGAACAGCAAGCAGACCAGGATGCTGGTGCTCCTGAACGATGGCAACTGCACCCTCTATTACCGCCTGTTCCTGGAGCAGTGCAGCCCTGAGGCTGTCGGCAATGGCCCCCTCGCTCTGCAGCTGGACCGCACAGAGGGGAGCATGCCGCCCCGGTCCCAGGACACCATCTGCCTGACCGCCTGTCCCAAACACCGCTCCCAGTACTCCTGGACCATCAGCTACTCTCTCCTCTCCCACAGAGATAACAAGGTTGGGGAGAAGCAGGAGCTGTGTCGCGTGTCCCTGATGGCCGTGTACCCCCTACTCTCCATCCTGGATATCTGCTCCATGGGCAGTGCCGAGGGCATCACCCGGAAGCACCTGTGGCGCCTCTTCTCCCTAGACCTGCTCAACAGTTACTTGGAGCGCGACCCCACCCCCTGGGAACTCACCTACAGAGTGCCCACCCGGCACAGCACCAGCCAGATCCCCTCTGTCTTCACCCCTCTGAAGCTCAACTTCAATTTTGGGGCAGCACCAATAGACGCCCCACCCTCTGTGGTGCTCCTGGCCCTGAAGAACAGTGGAGTGGTGCCCCTGGACTGGGCCTTCCTCTTCCCAAGTGACCAGCAGATCGACCTGGAGCTGTGGGCAGAGCAGGTGGAGTTTGACTGCACCGAGCTGCACCAAATGCGCGTGCAGGACAATTGCATATTCTCCATCAGCCCCAAGGCTGGGAGCCTGAGTCCTGGGCAAGAGCAGATGGTGGAGTTCAAATACAGCCACCTGTTCATTGGCACTGATCGCCTCCCGGTGCTCTTCAAGGTGTCCCATGGCCGGGAGATCCTGCTAAATTTCATAGGTGTGACAGTGAAGCTAGAGCAGAAGTACGTGCACTTCACCTCCACCAGCCATCAGTTCATCCCTGTCCCCATCGGCGACACACTGCCCCCGAGGCAGGTGGATGTGCCCATACACATCCTGGGATGGAACTCAGCCATCATCCGCTTCCAGGGAGTGGGCTATGACCCTCACATCATGGGCGACACAGCCCCATTCCACAACATCTCCTCATGGGACAATAGCTCCATCCACTCGAGGCTGATGGTTCCTGGACAGAGCAAGTGCAGCCGCCTGCTGTTCCTCAACAACATCTCCAAGAATGAGACAATTGTCTTTGTCTGGCAGCAGAAGGCTCTGGACTTTGGGGAGGTGTCTGTGAGTCCTATGAGAGGAAAGGTGGCTCCCGAAGAGACGATCCCATTTGTGGTGACCCTGAAGGCCTCAGTGCATGCCAGCTTCTATAGCATGGACCTGGTATGCAAGGTAGGATCAGCCTTAGAGAGAAGCTGGGATGGTGCACAGCTCCCAGTCTTGAGGTGTGGGGTGGTCTGTGAGATCCCCAGACCCCCAGAGAGAGGCAAAGGCCAACCTCTGGAAGAGTGGGAGGCCCACAGCACAGGCCCAGGCCAAGGCCCTCCAGACCTTGGTCTTCTCTCTCCTTGTCCTGAGCCACAGGTGTACCGGCAGAAACTCCTGAAGCAGTACCGTAAGGAACTGCAGGAGTGGAAGGACGAGAAGGAGCGGCAGGAAGTGGAGTTCACCATCACAGATAGGAAAGCAAAGAGAAGGGCATATTGTACAGCTTGTGAACCTGTGAGGAAGTACAGGACACTGCCCCCCATCAAGAACCAGTGGTGTCTCAACTGGCCAACCAGCTGGAACCTTAAGATCGCAAAGGAGGAGACACGCTGGCCATGCCCCCAGCCGCCCTCGCCAGGGATGCTCAGCTTAGGCCTCACTGCCCGCGCCCATGCCACTGACTACTTCCTGGCCAACTTCTCTGACTTTACCCGCCACTTCTTGCACCGGGAGCTGCCAAAGAGGAAGTACCCCAGGGAGGAGTCGGAGGCTGGTGAGGAAGAATCCCCGGACAAGTGGGCCCCTGTCTCCAAGCAGGAGAAGCAGCTCCTGACTGACTGTCTCACCATCATAATCAGGGGTCTGCTGGAGGACAAGATCTTCCATGAGGCTGTGGACCGAAACCTGGTGGAGCAAATGCCTTACTTCTGCCAGTTCTGGAATGAGCAGTCGGCAAGGTTCATGGCCCAGAACAGCAGCCTGCACTTAGTGCCAGCCATGTCTCAGTCCTCCAACAGCTCTGAGGTCAGCAAAGACAAAGAGGAGGAGGAAGACGAACGGAGGCTGAGGAAGAAGGAAGAGGGGGAAGAGGAGAAGAAGGACGAAGGGGAAGAGGAGGAGCTGGAGGAGGAAGAGGAGGAACAGGTGGAGGAGGAGATGGAAGAGGAGGAGCTGCAGGAGAAGGAAGAGAAGTTGCCCTGGACGGAGATTAAGCCCACGCTGCAGCCCACGTCCCAGGAGTCCCTGAAATGGCAGTGGCAGCAACAGCTGAAGGTCTTACTGAAGGAGAAGCAAGAGCAGGATGAGAAGGAGGCCATCAGCCGGCTCCCGGCTTTCGTTAGCCTGCAGGAGGCGCTGCTGGAGAACGTGATCCAGAACATCCTGGTGGAGGCGAGCCGCGGGGAGGTGGTGCTCACTTCGCGGCCACGCGTCATCGCCCTGCCGCCGCTCAGCGTTCCCAGGATTCTGACTCCCGACTCGCTGCCGGCGGCGTCCCCGGGGCCGCAGCAAGCGGAGATGCCCGGCTCGATTGAGCCGCCCCCCACCAACTGTTTGCAGACGCCAGCGCCCACCCTCTCCGACTTGCAGCTC

Related Sequences

bmy_13368T0 Protein

Length: 1828 aa      View alignments
>bmy_13368T0
MLIRAALSLLMRTRDSGDYTMNSGSCLSASTMAFPTITGGSVAMSAYSSSNASACVRTRAGQVEWAEQGQAGQPDSSVDTQKCFPKKQDKVKKRVIWGIEVAEELQWKGWELGKEITKNLVLKNLSLKIQKIKYRPPKTKFFFTVIPQPIFLSPGITLSLPIIFRPLEEKECVDQLWFEKAEGMFCVDLRAALPCHNLICPPSLQLPMCAMGDMAEAWFCLDNAGDLPTFFTWESPSPFQMLPTTGLLEPGQACRIKVTFQPLMAIIYDVQATCWYGEGSKQKSSIQLQAVAKCAQLLVSIKQKRPEDQDAEGVQKVLHFGSVAVGCTAERQIKLIEVAPDMLAKDEAFSCPTAHGIVPPGEKKCVSVFFHPETLDVKTMDYLSIMPSGCASQTLLKVVGFCRGPDVSLQYYCVDFSWVNLGKRSEQSLWIENKSDCTAHFQFDIDCQESVFSIRPAFGTLVGKARMTLHCAFQPTHPIIYFRRVACFIHHQHLAWYRTHLVRGLTLYPPDILGIMLREKKLERDKNGALMIPTEDLEDKPAPQYPLIPPMTEYFFDGTNDMAIFPPPVSIEPVEVDFGACPRPKDPNPVPLCLMNYTKGKITVAWTRRADCPFWVTPNPCDVPPLKSTAMRLHFQPPHPNCLYAVELEAFAVYKVLRSYNNIEEDCTVCPSWCLRLRARGHSYCAGLEHHIPQYTLDAPKLFPAVSPSEPSYRSLLLINKGSMLLTFNLAPRSSSDVSLRPSSGLVPPGAHQIFLISTYPKGTSWKQHVFYLQFNFCPQYLKEVSMQSREEPLQLKLDTCKSVFFKPTWVGCSSTSLFTFQNPSRLPLEFEWRVSQQHRKMLAVQPTRGIIQPNESLTLTWTFSPLEETKYLFRVGMWVWEAGLPPNTKPSATTHYMLRLVGMGITSSLSAKEKELDFGNVLVNSKQTRMLVLLNDGNCTLYYRLFLEQCSPEAVGNGPLALQLDRTEGSMPPRSQDTICLTACPKHRSQYSWTISYSLLSHRDNKVGEKQELCRVSLMAVYPLLSILDICSMGSAEGITRKHLWRLFSLDLLNSYLERDPTPWELTYRVPTRHSTSQIPSVFTPLKLNFNFGAAPIDAPPSVVLLALKNSGVVPLDWAFLFPSDQQIDLELWAEQVEFDCTELHQMRVQDNCIFSISPKAGSLSPGQEQMVEFKYSHLFIGTDRLPVLFKVSHGREILLNFIGVTVKLEQKYVHFTSTSHQFIPVPIGDTLPPRQVDVPIHILGWNSAIIRFQGVGYDPHIMGDTAPFHNISSWDNSSIHSRLMVPGQSKCSRLLFLNNISKNETIVFVWQQKALDFGEVSVSPMRGKVAPEETIPFVVTLKASVHASFYSMDLVCKVGSALERSWDGAQLPVLRCGVVCEIPRPPERGKGQPLEEWEAHSTGPGQGPPDLGLLSPCPEPQVYRQKLLKQYRKELQEWKDEKERQEVEFTITDRKAKRRAYCTACEPVRKYRTLPPIKNQWCLNWPTSWNLKIAKEETRWPCPQPPSPGMLSLGLTARAHATDYFLANFSDFTRHFLHRELPKRKYPREESEAGEEESPDKWAPVSKQEKQLLTDCLTIIIRGLLEDKIFHEAVDRNLVEQMPYFCQFWNEQSARFMAQNSSLHLVPAMSQSSNSSEVSKDKEEEEDERRLRKKEEGEEEKKDEGEEEELEEEEEEQVEEEMEEEELQEKEEKLPWTEIKPTLQPTSQESLKWQWQQQLKVLLKEKQEQDEKEAISRLPAFVSLQEALLENVIQNILVEASRGEVVLTSRPRVIALPPLSVPRILTPDSLPAASPGPQQAEMPGSIEPPPTNCLQTPAPTLSDLQL