Part of scaffold_854 (Scaffold)

For more information consult the page for scaffold_854 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB27A ENSTTRG00000008509 (Bottlenosed dolphin)

Gene Details

RAB27A, member RAS oncogene family

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008055, Bottlenosed dolphin)

Protein Percentage 85.17%
cDNA percentage 85.33%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0182)

RAB27A ENSBTAG00000012408 (Cow)

Gene Details

ras-related protein Rab-27A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016464, Cow)

Protein Percentage 96.65%
cDNA percentage 93.94%
Ka/Ks Ratio 0.06942 (Ka = 0.0138, Ks = 0.1988)

RAB27A  (Minke Whale)

Gene Details

RAB27A, member RAS oncogene family

External Links

Gene match (Identifier: BACU019458, Minke Whale)

Protein Percentage 99.04%
cDNA percentage 99.2%
Ka/Ks Ratio 0.1231 (Ka = 0.0022, Ks = 0.0181)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 630 bp    Location:635272..662430   Strand:+
>bmy_13275
ATGTCTGATGGAGACTATGATTACCTCATCAAGTTTTTAGCTCTGGGAGACTCTGGAGTAGGGAAGACCAGTGTACTTTACCAGTACACAGATGGTAAATTTAACTCCAAATTTATCACGACAGTCGGCATTGATTTCAGGGAAAAGAGAGTGGTGTACAGAGCCAATGGACCAGATGGAGCCAYTGGCAGAGGCCAGAGAATCCACCTGCAGTTATGGGACACAGCAGGGCAGGAGAGGTTCCGCAGCTTGACAACCGCATTCTTCAGAGATGCTATGGGGTTTCTTCTGCTTTTTGATCTGACAAATGAGCAAAGTTTCCTCAGTGTCAGAAACTGGATAAATATAGTGTTATGTGGAAATAAGAGTGATCTGGAAGACCAAAGAGTAGTAAAAGAGGAAGAAGCCAGAGGACTTGCAGAGAAGTATGGAATCCCCTACTTTGAAACTAGCGCTGCCAATGGGACAAACATAAACCAAGCGATTGAGATGCTCCTGGACCTGATAATGAAGCGAATGGAACGGTGTGTGGACAAGTCCTGGATTCCCGAAGGCGTGGTGCGATCCAACGGTCACACCTCTGCTGATCAGTTGAATGAAGAGAAGGAAAAGGGGTCATGTGGCTGTTGA

Related Sequences

bmy_13275T0 Protein

Length: 210 aa     
>bmy_13275T0
MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAXGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLSVRNWINIVLCGNKSDLEDQRVVKEEEARGLAEKYGIPYFETSAANGTNINQAIEMLLDLIMKRMERCVDKSWIPEGVVRSNGHTSADQLNEEKEKGSCGC*