Part of scaffold_842 (Scaffold)

For more information consult the page for scaffold_842 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP33 ENSTTRG00000000091 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 33

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000083, Bottlenosed dolphin)

Protein Percentage 94.02%
cDNA percentage 94.79%
Ka/Ks Ratio 0.25311 (Ka = 0.0121, Ks = 0.0476)

USP33 ENSBTAG00000020761 (Cow)

Gene Details

Ubiquitin carboxyl-terminal hydrolase 33

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027667, Cow)

Protein Percentage 95.83%
cDNA percentage 95.83%
Ka/Ks Ratio 0.14401 (Ka = 0.0193, Ks = 0.1337)

USP33  (Minke Whale)

Gene Details

ubiquitin specific peptidase 33

External Links

Gene match (Identifier: BACU014791, Minke Whale)

Protein Percentage 98.12%
cDNA percentage 98.83%
Ka/Ks Ratio 0.36608 (Ka = 0.0088, Ks = 0.024)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2319 bp    Location:374931..400039   Strand:+
>bmy_13222
ATGTCAGCTTTTCGAGGTCATTGTCCGCATTTGGATTCAGTTGGTGAAATAACTAAAGAAGATTTAATACAAAAATCTCATGGTTCTTGTCAGGATTGTAAAGTCAGAGGACCAAACCTTTGGGCGTGCCTGGAGAATAGATGTTCATATGTTGGCTGTGGTGAATCACAAGTAGATCATAGCACCATACATTCTCAGGAGACAAAGCATTATCTAACTGTGAACCTTACCACTCTTCGAGTATGGTGTTATGCTTGCAGCAAAGAAGTATTTTTGGATAGAAAATTAGGAACTCAGCCTTCATTACCTCATGTAAAACCACTTCACCAAACACAAGAAAATAGTGTCCAGGATTTTAAAATACCCAGTAACACAACATTAAAAACTCCTCTGGTTGCTGTATTTGATGATCTGGACATAGAAGTGGAAGAAGAAGATGAACTTAAGGCAAGAGGTATAATAATTCTCATCCCACCTTTGACACAGTTTTTTCTTGATTGTGGAGGACTAGCCCGAACAGATAAGAAACCAGCTATTTGTAAAAGTTATCTCAAACTGATGACAGAGCTGTGGCATAAAAGCAGGCCAGGATTTGTTGTGCCTACTAATCTGTTTCAAGGAATTAAAACTGTAAATCCAACATTTCGGGGGTATTCTCAGCAGGATGCTCAAGAATTCCTTCGATGTTTAATGGATCTGCTTCATGAAGAACTGAAAGAACAGGTCATGGAAGTAGAAGAGGATCCTCAAACTATAATGACTGAGGAGACCGTGGAGGAAGACAAGAGCCAGTCAGATGCAGATTTTCAGTCTTGTGAATCTTGTAGCAGCAGTGATAAAGCCGAAAATGAAAATGGGTCTAGAAGCTTTTCTGAAGATAATAATGAAACAACAATGTTAATTCAGGATGATGAAAACAATTCAGAAATTTCAAAAGATTGGCAAAAAGAGAAGATGTGCAATAAGATTAATAAAGCGAATTCTGAAGGAGAATTAGATAGAGACTCTGTGTCTGAAACAGTTGACTTGAACAATCAGGAAACTGTCAAAGTGCAAATACACAGCAGAGCTTCAGAATATATTACTGATGTCCATTTGAATGAGCTGTCTACATCACAGACCCTCCCATCAAGTGAAGGTGTTAACCCACGTTTATCAGCAAGCCCTCCGAAATCAGGCAGTTTGTGGCCAGGATTGGCACCCACACACAAAAAAGGTAGAAGTTTCAGTTATTCAGAAAAAAATGCTAAAGGAACTACTTTGATTTCTAAAAAAAATTTCTATCCTTGTTTTTCAATCCTAGCTCAGTCTGCATCATCTCCAAAGAGAAAAAAACAGCACAAGAAATACCGAAGTGTTATTTCAGACGTATTTGATGGAACAATCATTAGTTCAGTGCAGTGTCTGACGTGTGATAGGGTGTCTGTAACCCTCGAGACCTTTCAAGATCTGTCCTTGCCGATTCCTGGCAAGGAAGACCTTGCTAAGCTGCATTCATCAAGTCATCCAACATCTATAGTCAAAGCAGGATCATGTGGTGAAGCATATGCTCCACAAGGGTGGATAGCTTTTTTCATGGAATATGTGAAGAGATTGAGGAATGGAGTAAAGTTTTGTAAAGTACAAAAGTTTCCTGAGATTTTGTGCATCCATCTTAAAAGATTCAGACATGAACTGATGTTTTCCACCAAAATCAGTACCCATGTTTCATTTCCACTGGAAGGCCTGGATCTTCAGCCATTTCTTGCTAAAGATAGTCCAGCTCAAATTGTTACCTATGATCTTCTGTCAGTCATTTGTCACCATGGAACTGCAAGTAGTGGACACTATATTGCCTACTGCCGAAACAATTTAAATAATCTCTGGTATGAATTTGACGACCAAAGTGTCACTGAAGTTTCAGAATCTACTGTACAAAATGCAGAAGCTTATGTTCTCTTCTACAGGAAGAGCAGTGAAGAAGCACAAAAAGAGAGGCGGAGGATATCAAATTTGTTGAACATAATGGAACCAAGTCTCCTTCAGTTTTATATTTCTCGACAGTGGCTAAATAAATTTAAGACCTTTGCTGAACCTGGCCCTATTTCAAATAATGATTTTCTCTGTATTCATGGAGGTGTTCCTCCACGAAAAGCTAGTTATATTGAAGACCTGGTATTGATGCTGCCTCAGAACATTTGGGATAACCTATATAGCAGGTATGGAGGAGGACCAGCCGTCAACCATCTGTACATTTGTCACACTTGCCAGATTGAGGCGGAGAAAATTGAAAAAAGAAGAAAAATTGAATTGGAAATTTTTATTCGGGTAAAAAAATGA

Related Sequences

bmy_13222T0 Protein

Length: 773 aa      View alignments
>bmy_13222T0
MSAFRGHCPHLDSVGEITKEDLIQKSHGSCQDCKVRGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVKPLHQTQENSVQDFKIPSNTTLKTPLVAVFDDLDIEVEEEDELKARGIIILIPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWHKSRPGFVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTIMTEETVEEDKSQSDADFQSCESCSSSDKAENENGSRSFSEDNNETTMLIQDDENNSEISKDWQKEKMCNKINKANSEGELDRDSVSETVDLNNQETVKVQIHSRASEYITDVHLNELSTSQTLPSSEGVNPRLSASPPKSGSLWPGLAPTHKKGRSFSYSEKNAKGTTLISKKNFYPCFSILAQSASSPKRKKQHKKYRSVISDVFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKRLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKASYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKIELEIFIRVKK*