Part of scaffold_842 (Scaffold)

For more information consult the page for scaffold_842 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GIPC2 ENSTTRG00000015376 (Bottlenosed dolphin)

Gene Details

GIPC PDZ domain containing family, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014572, Bottlenosed dolphin)

Protein Percentage 81.75%
cDNA percentage 85.55%
Ka/Ks Ratio 0.9637 (Ka = 0.1428, Ks = 0.1481)

GIPC2 ENSBTAG00000011733 (Cow)

Gene Details

PDZ domain-containing protein GIPC2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015583, Cow)

Protein Percentage 81.44%
cDNA percentage 83.84%
Ka/Ks Ratio 0.47739 (Ka = 0.1477, Ks = 0.3093)

GIPC2  (Minke Whale)

Gene Details

GIPC PDZ domain containing family, member 2

External Links

Gene match (Identifier: BACU014794, Minke Whale)

Protein Percentage 85.23%
cDNA percentage 88.38%
Ka/Ks Ratio 0.90004 (Ka = 0.1248, Ks = 0.1386)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 792 bp    Location:67406..4859   Strand:-
>bmy_13217
ATGCCCCTGGGGCTGCGGAGAAAAAAGAAATTCAATACCAAGGAGACCTCCCGGCTGGTGGAGGGCGAGCGGACGAGGGCGGCTGGCGGCAGCCTCCCCAGCCTCCCGGCGCCCACCTGCAGGCTGGTTTTCCACACGCAGCTGGCCCACGGCAGCGCCACGGGCCGAGTGGAGAACTTCTCCAGCATCCAGGAGCTCTACGCCAAGATCGCGGGCGTGTTTGAGATTTCGCCGTCGGAGATCTTATATTGCACTTTAAATACACCTAAAGTTGACATGGGAAAACTCTTAGGAGCACAGATAGGTCTTGAAGATTTCATATTTGCCCATGTGAAAGGGATCAAAAAAGAAGTGAATGTGTATAAATCTGAGGATTCACTTGGTCTCACCATTACAGATAATGGTGCTGGCTATGCTTTTATAAAGAGAATTAAAGATGGCAGCATAGTTGACTCAGTTAAAACARTCTGTGTGGGGGATCACATTGAAGCCATCAATGGAGAAACTATCGTTGGGTGGCGTCACTTTGATGTTGCTAAGAAGTTAAAGGAATTAAAAAAAGAGGAACTCTTTACCTTGAAGTTAATAGAACCTAAGAAGGCCTTTGGGCAGTTAATGACAATGATGGGTGAATGCAGTGGGTCGGGGCAATTACCTTTCCCCACCCTAAGCAAAAAGTTGCTGGTACACCTTAACTTGGATGTTAGGTTGCCCTCTGAAACCAAAGCAAAGGCGATTGAAAAGGTTGATGATCTTCTTGAATTGTACATGGGAATTCGGGATATCGATTTA

Related Sequences

bmy_13217T0 Protein

Length: 264 aa      View alignments
>bmy_13217T0
MPLGLRRKKKFNTKETSRLVEGERTRAAGGSLPSLPAPTCRLVFHTQLAHGSATGRVENFSSIQELYAKIAGVFEISPSEILYCTLNTPKVDMGKLLGAQIGLEDFIFAHVKGIKKEVNVYKSEDSLGLTITDNGAGYAFIKRIKDGSIVDSVKTXCVGDHIEAINGETIVGWRHFDVAKKLKELKKEELFTLKLIEPKKAFGQLMTMMGECSGSGQLPFPTLSKKLLVHLNLDVRLPSETKAKAIEKVDDLLELYMGIRDIDL