Part of scaffold_839 (Scaffold)

For more information consult the page for scaffold_839 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNRC6C ENSTTRG00000010828 (Bottlenosed dolphin)

Gene Details

trinucleotide repeat containing 6C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010270, Bottlenosed dolphin)

Protein Percentage 96.79%
cDNA percentage 97.27%
Ka/Ks Ratio 0.41844 (Ka = 0.0212, Ks = 0.0507)

TNRC6C  (Minke Whale)

Gene Details

trinucleotide repeat containing 6C

External Links

Gene match (Identifier: BACU011560, Minke Whale)

Protein Percentage 91.92%
cDNA percentage 93.39%
Ka/Ks Ratio 0.5663 (Ka = 0.0602, Ks = 0.1063)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2817 bp    Location:431277..366811   Strand:-
>bmy_13162
ATGGCTACAGGGAGTGCCCAGGGCAGCTTCACTGGACATACCAAGAAGACGAACGGCAATAATGGCACCAATGGCGCACTCGTCCAAAGCCCTTCTAATCAGAGTGCCCTTGGGGCGGGGGGAGCAAACGTTTCGTCAGGCTGGGGAGAAATGCCTAATGTTCATTCAAAGGCTGAAAATTCTTGGGGAGAGCCATCCTCCCCTTCTACCCTGGTTGATAACGGCACAGCAGCATGGGGCAAGCCGCCCAGCAGCGGCAGCGGATGGGGGGACCAGCCCACCGAGCCGGCGGTGACATTTGGAAGAGCCGGCGCCCCCGCGGCCGCCCCAGCCCTGTGCAAACCAGCTTCAAAATCTATGCAAGAAGGCTGGGGCAGCGGCGGGGACGATGCGAACCTCGGTGCCGGTCAGTGGGAGGACGAGGACGGGGGCATGTGGAACAACGCCGCTTCCCAAGAAAGCACCTCCTCCTGCAGTTCCTGGGGGAACGCCCCCAAAAAAGGACTCCAAAAGGGCATGAAAACATCTGGCAAGCAGGACGAGGCCTGGATCATGACCCGGCTGATCAAACAACTCACAGACATGGGCTTCCCGAGAGAGCCAGCTGAAGAGGCCTTGAAGAGTAACAATATGAATCTTGACCAGGCCATGAGCGCTCTGCTGGAAAAGAAGGTGGACGTGGACAAGCGTGGACTGGGAGTGACCGACTACAATGGGATGGTCACCAAGCCCCTTGGCTGCCGCCCACCCATCTCCAAAGAGTCTTCCGTGGACCGCCCCACCTTCCTGGACAAGGATGGCGGCCTCGTGGAAGAGCCCACGACTTCACCATTTTTGCCTTCACCAAGCCTGAAGCTCCCCCTTTCCAACAGTGCACTCCCTAATCAGGCCCTGGGCGGGATTGCCTCAGGGCTGGGCATGCAAAACTTGAATTCTTCTAGACAGACACCGAGTGGCAATCTGGGCATGTTTGGCAGCAGCGGAGCAGCACCAGCGAGGACCTTGCAGCAGCCGCCACAGCCGCCCGTGCAGCCCCTGAGCTCCTCCCAGCCCAGTCTCCGTGCTCAAGTGCCTCAGTTTCTATCCCCTCAGGTTCAAGCACAGCTTTTGCAGTTTGCAGCAAAAAACATTGGTCTCAACCCTGCACTATTAACCTCGCCAATTAATCCTCAGCATATGACGATGTTGAACCAGCTCTATCAGCTGCAGCTGGCGTACCAACGTTTACAGATCCAGCAGCAGATGCTACAGGCCCAGCGGAACGTTTCCGGACCCATGAGACAACAGGAGCAGCAAGTTGCGCGCACAATCACTAACCTGCAGCAGCAGATCCAGCAGCACCAGCGCCAGCTGGCCCAGGCCCTGCTCGTGAAGCCGCCGCCGCCCCCGCCGCACCTGTCTCTGCACCCCTCTGCAGGCAAATCGGCCCTGGACAGCTTCCCCCCCCACCCCCAGGCCCCCGGCCTCCCCGACCTGCAGACCAAAGAGCAGCAGTCTTCACCCAGCACCTTCGCTCCCTACCCTCTCGGTGCTATCCCTGGAGGTCTGAGCATTGGGCCTCCAGCTAAGTCCTCCATCGACGACTCCTATGGCCGGTACGATTTAATCCAGAGCAGTGAGTCACCAGCCACTCCTCCTGTAGCTGTTCCCCACAGCTGGTCACGTGCCAAATCTGACAGTGACAAAATCTCAAATGGCTCCAGCATCAACTGGCCCCCAGAGTTCCATCCTGGAGTTCCCTGGAAAGGACTTCAGAATATAGATCCCGAGAATGACCCTGACGTCACTCCTGGAAGTGTCCCCACCGGGCCTACCATCAATACCACCATACAGGATGTCAACCGCTACCTCCTCAAGAGTGGAGGGTCCTCCCCACCGTCATCTCAGAATGCCACGCTGCCTTCCTCGAGTGCCTGGCCGCTCGCTGCCTCCGGCTACAGTCGCTCCCTCAGCAGCCTCGCGCCCGCTCCTAGTATCGCAGGTAAACTGTCAGACATTAAATCGACGTGGTCCTCTGGCCCTGCCTCTCACACACAAGCCTCTCTGTCTCATGAACTGTGGAAGGTGCCCAGAAACACTACTGCACCCACAAGGCCACCTCCAGGGTTAACCAATCCCAAGCCTTCCTCCACCTGGGGAGCCAGTCCCCTCGGCTGGACCAGCTCCTACTCCTCGGGTTCTGCCTGGAGTACTGACACCTCAGGAAGGACAAGCAGCTGGCTCGTTCTCCGCAACCTCACGCCCCAGATCGATGGCTCCACCCTGCGGACGCTGTGCTTGCAGCACGGGCCTCTCATCACATTCCACCTGAACCTAACCCAAGGCAACGCCGTGGTCCGGTACAGCTCCAAGGAGGAAGCCGCCAAGGCCCAGAAGTCCCTGCACATCTGGCAGCCCAGCGCTGGGACCAGCCAGACGCGGCTGGGCGCCTCGGGCAGCTCCCACGGCCTGGTGCGCAGCGACACTGGGCACTGGAACGCCCCGTGCCTGGCAGGCAAAGGGAGCAGCGACCTGCTGTGGGGCGGGGTCCCCCAGTACTCCAGCAGCCTGTGGGGCCCCCCCAGTAGCGACGACGGCAGGGGGCCTCGGCCACGTTTTATCGAGAAGATAGGACCCGGGTTGGCCCCCGCAGGTGAGCTCCCGGCTCTGACCGACCTCTTTAGAAAGCGGAGGAGGAAAGCGCAGAAGGGCCATCATCCGGAGGAGAAACGAAAGGCTAGAACGAAACTCATGGAACTCAAGAATGTGGACAGTCGAATGTACTTGACACCCTACCCTTGTACGCACCTGGAGGCACCGACCCTGCCGGGGCCGTGA

Related Sequences

bmy_13162T0 Protein

Length: 939 aa     
>bmy_13162T0
MATGSAQGSFTGHTKKTNGNNGTNGALVQSPSNQSALGAGGANVSSGWGEMPNVHSKAENSWGEPSSPSTLVDNGTAAWGKPPSSGSGWGDQPTEPAVTFGRAGAPAAAPALCKPASKSMQEGWGSGGDDANLGAGQWEDEDGGMWNNAASQESTSSCSSWGNAPKKGLQKGMKTSGKQDEAWIMTRLIKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVDVDKRGLGVTDYNGMVTKPLGCRPPISKESSVDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQALGGIASGLGMQNLNSSRQTPSGNLGMFGSSGAAPARTLQQPPQPPVQPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTITNLQQQIQQHQRQLAQALLVKPPPPPPHLSLHPSAGKSALDSFPPHPQAPGLPDLQTKEQQSSPSTFAPYPLGAIPGGLSIGPPAKSSIDDSYGRYDLIQSSESPATPPVAVPHSWSRAKSDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPPSSQNATLPSSSAWPLAASGYSRSLSSLAPAPSIAGKLSDIKSTWSSGPASHTQASLSHELWKVPRNTTAPTRPPPGLTNPKPSSTWGASPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHIWQPSAGTSQTRLGASGSSHGLVRSDTGHWNAPCLAGKGSSDLLWGGVPQYSSSLWGPPSSDDGRGPRPRFIEKIGPGLAPAGELPALTDLFRKRRRKAQKGHHPEEKRKARTKLMELKNVDSRMYLTPYPCTHLEAPTLPGP*