Part of scaffold_839 (Scaffold)

For more information consult the page for scaffold_839 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMC6 ENSTTRG00000010831 (Bottlenosed dolphin)

Gene Details

transmembrane channel-like 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010276, Bottlenosed dolphin)

Protein Percentage 87.47%
cDNA percentage 88.38%
Ka/Ks Ratio 0.15314 (Ka = 0.0186, Ks = 0.1215)

TMC6 ENSBTAG00000018661 (Cow)

Gene Details

transmembrane channel-like protein 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040210, Cow)

Protein Percentage 89.81%
cDNA percentage 90.77%
Ka/Ks Ratio 0.0858 (Ka = 0.0477, Ks = 0.5558)

TMC6  (Minke Whale)

Gene Details

transmembrane channel-like 6

External Links

Gene match (Identifier: BACU011561, Minke Whale)

Protein Percentage 93.53%
cDNA percentage 94.98%
Ka/Ks Ratio 0.25591 (Ka = 0.0367, Ks = 0.1432)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2310 bp    Location:348066..363875   Strand:+
>bmy_13161
ATGTCCCAGTCGCTGGCTTTTGCTCTCAATGTGCCTGAGACCCCACAGGACCCAGAGGACAGCCAGGAGCCCAGCCCCTATGATGAGAGCGAAGTGCACGACTCTTTCCATCAGCTCATCCAGGAGCAGAGCCGCTGGGTGGCCGAGGAGGGGCTGGAGCTGCAGCAGAGGGTGCCGGGGGCTGGAGCCCTGGGGGCCTCAGGCAGTGACCGCCAGGCCTTGCTGGGGCCCGAGGGCGCCCCTGTCTACAGCACGGCCACACTCCGCATCTTGGCCAGCATGCCCAGTCGCACCATTGGCCGGAGCCGCGGCGCCATCCTCTCCCAGTACTACAGCCGCACAGTGAGGCTGCGCCGCAGGGCCGGCCGGCCGCAGCTCAGGGATGTGGGCCGCTCGGCCCGCCCCAGCCTCCGCCTGTACGACCTGGAGCTGGACTCTGCGGTCCTGGAGGAGGATGAGAAGCGGGGCCTCCTGGTGAAGGAGCTTCAGGGCCTGACGGTGGCCCAGCGGGACCACATGCTCCGGGGGATGCCGCTGAGCCTGTCCGAGAAACGCTGCCTGCGAGAGGAGAGCCGGCCCCCGAGGGGCAAGCGGAGGGCCCGGGGGCACCGTGGGCTCCTCTCCTGCTGCAGCCAGCTGCGCGACAGCTGTATCCTGGCGTCACACGACCTGGGGCTCGCACTGCTCTCGGGGCTGCAGGCCCTGATGCCCTGGCACTACGCCCTGAAGCGGATTGGGGGCCAGTTTGGCTCCAGCGTTCTCTCCTACTTCCTCTTCCTCAAGACCCTGCTGGCCTTCAACACCCTGCTGCTGCTGCCACTGCTGGCCTTTATCGTGGGCGTGCAGGCCGCCTTCCCGCCTGCACCCTCGGGCTCCGTGCCCGCCTTCAGGGGCCTGGAGCTTCTCACGGGTGGGGGCCGCTTCACCCACACCGTCATGTACTACGGCTACTATAGTAACGCGACGCTGAACCAGCCCATGTCCCGCTCTTTTGGGGAGAGCTACCGGGTGGGCAGCACTTCGGGGGTCCATGCCATCACTGTTTTCTGTTCCTGGGACTACAAAGTGACTCAGAAATGGGCCACCCGCCTCCAGCACGACAATATCCGAACCCAGCTGAAGGAGCTGCTGGCCGAGGGGCAGCTGCGGCAGCGCCCCCGGAGGGCGTGCGGACGGCTGTGGCAGGCGGCCGTGCTGGGGCTCGTGTGGCTGCTGTGTTTGGGGACCACGCTGGTGTGCGCCCTGGCCGTCTACACCTTCTCAGAGCTCGTGATCCAGCAGAGCCGCGTGTCTGCTGAGTGGGACGGGGCGCTGCTGGCCCTGCCCCTGGTGGTCTGCCTTCTCAACCTGGGGGCCCCCTACCTGTTCCGCGTCCTGGCCGCCCTGGAGCGGCACGACTCCCCGGTGCTAGAGGTGTACGTGGCCATCTGCAGGAACCTCATCCTCAAGATGGTCATCCTGGGGATTCTTTGCTACCACTGGCTGGGCCGCAGGGTGGGCACCCTGAAGGACCAGTGCTGGGAGGACTTTGTGGGCCAGGAGCTGTACCGGCTCATGGTGATGGACTTCATCTTCACGCTGCTGGACACGCTTCTGGGAGAGCTGGTGTGGAGGCTCATCTCTGAGAAGAGGTCTCAGAGGAAGGGGAAGCCTGAGTTCGACATTGCGGGGAATGTTCTGGAGCTGATTTACGGGCAGACCCTGACCTGGCTGGGGGTCCTCTTCTCCCCGCTCCTCCCCGCCATGCAGATCATCAAGCTGCTGTTCCTCTTCTACGTCAAGAAGACGAGCCTGATGGCCAACTGCCAGGCACCCCGCAGGCCCTGGAAGGCCTCCCACATGAGCACCGTCTTCATCTCGCTTCTCTGCTTCCCCTCCTTTCTGGGCGCTGCCATCTTCCTCTGCTACGCCATCTGGCAGGTGAAGCCCTCGAGCATCTGCGGCCCCTTCCGGACCCTGGACACCATGTATGAGGCGGGCAAGGTGTGGGTGCGCCACCTGGAGGAGGCGGGCCCCAGGGTCTCCTGGCTGCCCTGGATCCACCGGTACCTGGTGGAAAGTGCCTTCCCCATCTACTTGGCGTCGGCCCTGCTGCTGGCCGTGATCTACCTCAACATCCAGGTGGTGAAGGGCCAGCGGAAGGTCATCTGCCTCCTCAAGGAGCAGCTAAGCAACGAGGGGGAAGACAAGATCTTCTTAATCAACAAGCTTCAGCGTATCTACGAGAGGAAGGAGAGGAGCAGGGTTGGTAGAACAGAGGAGGCTGTGACGCCCCCGGCCGTATTCACAGACGACTGGGATGCCCAGTAG

Related Sequences

bmy_13161T0 Protein

Length: 770 aa      View alignments
>bmy_13161T0
MSQSLAFALNVPETPQDPEDSQEPSPYDESEVHDSFHQLIQEQSRWVAEEGLELQQRVPGAGALGASGSDRQALLGPEGAPVYSTATLRILASMPSRTIGRSRGAILSQYYSRTVRLRRRAGRPQLRDVGRSARPSLRLYDLELDSAVLEEDEKRGLLVKELQGLTVAQRDHMLRGMPLSLSEKRCLREESRPPRGKRRARGHRGLLSCCSQLRDSCILASHDLGLALLSGLQALMPWHYALKRIGGQFGSSVLSYFLFLKTLLAFNTLLLLPLLAFIVGVQAAFPPAPSGSVPAFRGLELLTGGGRFTHTVMYYGYYSNATLNQPMSRSFGESYRVGSTSGVHAITVFCSWDYKVTQKWATRLQHDNIRTQLKELLAEGQLRQRPRRACGRLWQAAVLGLVWLLCLGTTLVCALAVYTFSELVIQQSRVSAEWDGALLALPLVVCLLNLGAPYLFRVLAALERHDSPVLEVYVAICRNLILKMVILGILCYHWLGRRVGTLKDQCWEDFVGQELYRLMVMDFIFTLLDTLLGELVWRLISEKRSQRKGKPEFDIAGNVLELIYGQTLTWLGVLFSPLLPAMQIIKLLFLFYVKKTSLMANCQAPRRPWKASHMSTVFISLLCFPSFLGAAIFLCYAIWQVKPSSICGPFRTLDTMYEAGKVWVRHLEEAGPRVSWLPWIHRYLVESAFPIYLASALLLAVIYLNIQVVKGQRKVICLLKEQLSNEGEDKIFLINKLQRIYERKERSRVGRTEEAVTPPAVFTDDWDAQ*