Part of scaffold_839 (Scaffold)

For more information consult the page for scaffold_839 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYNGR2 ENSTTRG00000010844 (Bottlenosed dolphin)

Gene Details

synaptogyrin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010283, Bottlenosed dolphin)

Protein Percentage 88.46%
cDNA percentage 91.19%
Ka/Ks Ratio 0.25382 (Ka = 0.0716, Ks = 0.282)

SYNGR2 ENSBTAG00000019069 (Cow)

Gene Details

Synaptogyrin-2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025388, Cow)

Protein Percentage 83.17%
cDNA percentage 87.5%
Ka/Ks Ratio 0.16824 (Ka = 0.0924, Ks = 0.5493)

SYNGR2  (Minke Whale)

Gene Details

synaptogyrin 2

External Links

Gene match (Identifier: BACU011563, Minke Whale)

Protein Percentage 91.83%
cDNA percentage 94.23%
Ka/Ks Ratio 0.23515 (Ka = 0.0432, Ks = 0.1837)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 627 bp    Location:320495..319404   Strand:-
>bmy_13157
ATGTCCCACGAGGGTAGCAGTCACTCAGCCCTTCCCCTGCCTCCCCCTCAGGTCTTCGCCTTGATCGTGTTCTCATGCATCTTCGGTGAGGGCTACAGCAACACCCCCAGCTCCAAACAGCAGTACTGCGTGTTCAACCTCAACGAGGACGCGTGCCGCTTCGGCAGCGCCATCGGGGTGCTGGCCTTCCTGGCCTCGGCCTTCTTCCTCGTGGTCGACGTCTATTTCCCCCAGATCAGCAACGCCACTGACCGCAAGTACCTGGTCATCAGCGACCTGCTCTTCTCAGCTCTCTGGACCTTCCTGTGGTTTGTTGGCTTCTGCTTCCTTGCCAATCAATGGGCAGCCACGGAGCCGAAATATGTTCTGGTGGGAGCCGACTCAGCCCGGGCGGCCATCACCTTCAGCTTCTTTTCTGTCTTCTCCTGGGGCGTGCTGGCCTCCTTGGCCTACCAGCGCTACAAGGCCGGAGTGGACGACTTCATCCAGAACTACGTGGACCCCACTCTGGACCCCAGCACGGCCTACGCCTCCTACCCAGGCGCGCCTGCGGACAGCTACCAACAGCCGCCCTTCACCCAGAACGCCGAGACCACAGAGGGCTACCAGCCGCCCCCCGTGTACTGA

Related Sequences

bmy_13157T0 Protein

Length: 209 aa      View alignments
>bmy_13157T0
MSHEGSSHSALPLPPPQVFALIVFSCIFGEGYSNTPSSKQQYCVFNLNEDACRFGSAIGVLAFLASAFFLVVDVYFPQISNATDRKYLVISDLLFSALWTFLWFVGFCFLANQWAATEPKYVLVGADSARAAITFSFFSVFSWGVLASLAYQRYKAGVDDFIQNYVDPTLDPSTAYASYPGAPADSYQQPPFTQNAETTEGYQPPPVY*