Part of scaffold_826 (Scaffold)

For more information consult the page for scaffold_826 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF125 ENSTTRG00000010932 (Bottlenosed dolphin)

Gene Details

ring finger protein 125, E3 ubiquitin protein ligase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010360, Bottlenosed dolphin)

Protein Percentage 88.72%
cDNA percentage 91.79%
Ka/Ks Ratio 0.5112 (Ka = 0.0737, Ks = 0.1442)

RNF125 ENSBTAG00000003113 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF125

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004048, Cow)

Protein Percentage 85.13%
cDNA percentage 87.35%
Ka/Ks Ratio 0.28094 (Ka = 0.0918, Ks = 0.3268)

RNF125  (Minke Whale)

Gene Details

ring finger protein 125, E3 ubiquitin protein ligase

External Links

Gene match (Identifier: BACU001575, Minke Whale)

Protein Percentage 89.74%
cDNA percentage 92.14%
Ka/Ks Ratio 0.46429 (Ka = 0.0686, Ks = 0.1478)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 747 bp    Location:271899..302155   Strand:+
>bmy_13025
ATGCGTGCAGCACACGTGGTGAGAACGTGTGGCCCCAGGGAGGTCTTGCAGGGAAGATTCTGCCGTTCTTGCATTGCTACCAGTCTCAAGAACAATAAGTGGACCTGTCCTTACTGCCGGGCATATCTTCCTTCTGAAGGAGTTCCAGCAACTGATGTAGCCAAGAAAATGAAATCCGAGTTCCAGAATTGCACCGAGTGTGACACCCTGGTTTGCCTCAGTGAAATGAGGGCACACATAAGAACATGTCAGAAGTACATAGCTAAGTATGGACCACTACAAGAACTTGGAGAGACAGCAACAAGGTGTGTATGTCCATTTTGTCAGAAGGAATTGGATGAAGACAGCTTGCTGGATCATTGCATTACTCATCACAGATCAGAAAGGAGACCTTTCTGTCCACTTTGCCATTTAGTACCTAATGAGAATCCAAGCAGCTTCAATGGCAGCTTAATAAGACATTTGCAAGTCAGTCACACTTTGTTTTATGATGATTTCATAGATTTTAATATAATTGAGGAAGCTCTTATTCAAAGGGTTTTAGACCGGTCACTTCTGGAATATGAATATTTTTCTAAAACGTATACTGAGAAATTGGATTGGGAATCTACGGTGAAGATAGTTCCAGGTAGAGAAAAAGAAGAATTGGAAAGTGAGAATGCTGAGGTCCAAATCAAGAAAGTAATCATCTGCTGGACCGAAGTGAAGAGCTCAAGTTCCCTGATTCACTTCCCTTTCTGTGCGTAA

Related Sequences

bmy_13025T0 Protein

Length: 249 aa      View alignments
>bmy_13025T0
MRAAHVVRTCGPREVLQGRFCRSCIATSLKNNKWTCPYCRAYLPSEGVPATDVAKKMKSEFQNCTECDTLVCLSEMRAHIRTCQKYIAKYGPLQELGETATRCVCPFCQKELDEDSLLDHCITHHRSERRPFCPLCHLVPNENPSSFNGSLIRHLQVSHTLFYDDFIDFNIIEEALIQRVLDRSLLEYEYFSKTYTEKLDWESTVKIVPGREKEELESENAEVQIKKVIICWTEVKSSSSLIHFPFCA*