Part of scaffold_826 (Scaffold)

For more information consult the page for scaffold_826 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010121, Cow)

Protein Percentage 96.7%
cDNA percentage 95.44%
Ka/Ks Ratio 0.11366 (Ka = 0.0165, Ks = 0.1454)

TRAPPC8  (Minke Whale)

Gene Details

trafficking protein particle complex 8

External Links

Gene match (Identifier: BACU001574, Minke Whale)

Protein Percentage 99.36%
cDNA percentage 99.29%
Ka/Ks Ratio 0.14037 (Ka = 0.0026, Ks = 0.0186)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 4221 bp    Location:177199..89215   Strand:-
>bmy_13023
ATGGCCCAGTGTGTACAATCAGTGCAGGAGCTCATCCCGGACTCCTTCGTCCCCTGTGTCGCCGCGCTGTGTAGCGACGAAGCCGAGCGGCTCACTCGTCTCAGTCACCTTAGCTTCGCGGAGTTGCTTAAGCCCTTCTCTCGCCTCACTTCTGAGGTTCATATGAGAGATCCCAATAATCAGCTTCACGTAATCAAAAACTTGAAGATAGCAGTAAGCAACATTATCACCCAACCACCTCAGCCTGGAGCCATTCGGAAGCTTTTGAATGATGTTGTTTCTGGCAGTCAGCCTGCAGAAGGATTAGTAGCTAATGTGATTACGGCAGGAGATTACGACCTCAACATCAGTGGTATGTTGGTGGCATCGTCTAGTGAAGCTGAACCTATGGAACAGTTTKCAAAGTTGTCACAAGAACAGCATCGAATTCAGCACAACAATGATTATTCCTACCCCAAGTGGTTTATACCAAATACACTTAAATATTATGTACTTTTACATGATGTAAGTGCAGGAGATGAACAGAGAGCTGAATCAATTTATGAAGAAATGAAACAGAAATATGGAACTCAGGGTTGCTATTTACTTAAAATTAACTCTCGAACACCTAATCGAGCGTCAGATGAACAGATACCAGATCCTTGGAGTCAGTATCTCCAGAAAAATAGTATTCAAAACCAGGAATCATATGAAGATGGCCCTTGTACTATAACTTCAAATAAGAATTCTGATAGTAACTTGCTTTCATTGGATGGATTAGATAACGAAGTCAAAGTAGATGGCTTACCAAACAACTTTAGAACTCACCCGCTTCAATTGGACCCATCTGGTGACTCTTCTAACAACATTGATGGCCCAGATCATGTAAAATCTGCTTCATCATTACATGAAACAAAGAAAGCAAATGCTGGAATTATTCATGGTGCATGTTTAACCCTTACTGATCATGATAGAATTCGACAGTTTATACAAGAGTTCACATTTCGGGGCCTCTTGCCACATATAGAGAAAACAATTCGGCAATTAAATGATCAGCTAATATCAAGAAAAGGTTTGAGTCGATCTCTATTTTCTGCAACTAAAAAATGGTTTAGTGGCAGTAAAGTTCCAGAAAAGAGCATTAATGAGCTAAAAAATACATCTGGATTGCTGTATCCACCAGAAGCTCCAGAGCTTCAAATCAGGAAAATGGCTGACTTATGTTTTTTGGTGCAGCATTATGATTTGGCTTACAGTTGCTATCATACTGCAAAGAAAGATTTTCTTAATGATCAAGCAATGCTTTATGCAGCTGGTGCCTTGGAAATGGCAGCAGTGTCAGCGTTCCTTCAGCCAGGAGCACCCAGGCCATACCCTGCACATTATATGGATACAGCAATCCAGACATACAGGGATATCTGCAAGAATATGGTATTGGCTGAAAGATGTGTATTGCTCAGTGCTGAAATCTTAAAAAGCCAAAGCAAATATTCAGAGGCTGCAGCTCTCCTAATACGGTTGACCAGTGAGGATTCTGATCTTCGAAGTGCACTTCTTTTGGAACAGGCGGCACATTGCTTTATAAACATGAAGAGTCCCATGGTTAGAAAATACGCGTTTCATATGATACTGGCAGGCCACCGGTTTAGTAAAGCAGGGCAGAAGAAACATGCTTTACGCTGCTATTGTCAAGCCATGCAAGTTTACAAAGGAAAAGGCTGGTCTCTTGCAGAGGATCACATTAACTTCACCATTGGACGTCAGTCCTATACTCTTAGGCAACTGGACAATGCTGTGTCTGCTTTTAGGCATATTTTAATCAATGAAAGTAAACAATCTGCTGCTCAACAAGGGGCCTTCCTCAGAGAATATCTTTATGTTTACAAGAATGTAAGTCAGCTATCACCAGATGGTCCTTTACCACAGCTTCCTTTACCATATATTAACAGTTCAGCAACACGGGTTTTCTTTGGCCACGACAGACGACCAGCAGATGGTGAAAAGCAAGCAGCTACTCATGTAAGTCTTGATCAAGAATATGACTCTGAATCCTCTCAGCAATGGCGAGAACTTGAGGAACACGTTGTGGCTGTGGTCAACAGAGGAGTACTTCCATCCAACTTCCACCCCACAGAGTACTGTTTGAACAGTTATTCGGATAACTCAAGATTTCCGCTCACAGTTGTAGAAGAGCCAATAACAGTGGAAGTGGCTTTTAGAAACCCTTTGAAAGTTCCACTTTTGTTGACTGATTTGTCATTGCTCTGGAAGTTTCAACCTAAAGATGTCAGTGGAAAGGAAAATGGAGAAGTTAAAGAACTAGTAAAAGGTGAACCTGAAATGATTGGAACTGAAGTTGTTTCAGAATTCTTAATTAATAGTGAAGAATCTAAAGTGGCAAGGCTAAAGCTCTTTCCCCATCACATAGGGGAGCTGCATATTCTGGGAGTTGTTTATAATCTTGGCACTATTCAGGGCTCCATGACAGTAGATGGCATTGGTGCTCTTCCTGGATGTCACACAGGAAAGCATTCCTTGAGTATGTCAGTCCGAGGGAGACAGGATTTAGAAATTCAAGGTCCTCGACTTAACAACACAAAAGAGGAGAAAACATCTATTAAATATGGTCCTGATCGACGTCTAGATCCCATAATCACTGAGGAAATGCCACTGTTGGAGGTGTTCTTTATACATTTTCCTACAGGGCTTCTCTGTGGAGAAATCCGAAAAGCATATGTAGAATTTGTCAATGTCAGCAAATGTCCTCTTACTGGATTGAAGGTTGTTTCTAAACGTCCAGAGTTCTTTACTTTTGGTGGTAACACAGCTGTTCTAACACCACTAAGTCCCTCAGCTTCTGAGAACTGTAGTGCTTACAAGACTGTTGTGACAGATTCTACCTCTGTGTGTACAGCACTCATATCATCAGCTTCTTCTGTAGACTTTGGCATTGGCATAGGAAGTCAGCCAGAGGTGATTCCTGTTCCCCTTCCTGACACAGTTCTTCTACCTGGAGCTTCAGTTCAGCTACCAATGTGGTTACGTGGGCCAGATGAAGAAGGTGTCCATGAAATTAACTTTTTGTTTTACTATGAAAGTGTTAAAAAGCAGCCTAAAATACGTCACAGAATATTAAGACACACGGCAGTCATTTGTACCAGTMGATCTTTGAATGTGCGAGCCACTGTCTGCAGAAGTAATTCTCTTGAAGATGAGGAGGGCAGAGGAGGCAATATGCTAGTCTTTGTGGATGTGGAAAATACCAATACCAGTGAAGCAGGTGTTAAGGAATTCCATATAGTACAAGTATCAAGTAGTAGCAAACACTGGAAGTTACAGAAATCTGTAAATCTCTCTGAAAACAAAGATGCCAAACTTGCCAATAGGGAGAAGGGAAAGTTTTGCTTCAAGGCAATACGATGTAAGGAGGAAGAAGTTGCTACACAGTCCTCAGAAAAATATACCTTTGCAGATATCATCTTTGGAAATGAACAGATAGTAAGTTCAGCAAGCCCATGTGCAGATTTCTTTTATCGAAGTTTATCCTCTGAATTGAAGAAACCACAAGCCCAGTCTTCTCGGCATACAGAAAAGCAGTCAATAGAGGACACTATGAGATTAATTCAGAAGTGCAATGAGGTGGATTTGAATATTGTTGTATTGTGGAAGGCATACGTGGTGGAAGACAGTAAGCAGCTTATTTTGGAAGGTCAGCACCATGTTGTTCTTCGCACTATAGGAAAAGAAGCTTTTTCATATCCTCAGAAACGGGAGCCACCAGAAATGGAACTATTAAAATTTTTCAGGCCAGAAAACACTACAGTTTCCTCAAGACCATCAGTAGAGCAGCTTTCTAATCTCATTAAAACGAGTCTTCACTATCCAGAATCATTTAGTCATCCTTTTCATCAAAAAAGCCTTTGTTTAGTACCAGTGACCCTTTTACTTGCCAATTGTTCAAAGGCCGACGTCGATGTAATAGTTGATCTTAGGCATAAAACAACAAGCCCAGAAGCATTGGAAATCCATGGATCATTTACATGGCTTGGACAAACACAATATAAACTTCATCTTAAAAGCCAGGAGCTTCACAGTTTGCAGCTGAAAGCATGCTTTGTCCATACAGGTGTTTATAACCTTGGAACTCCTAGGGTATTTGCCAAGTTATCAGACCAAGTTACAGTGTTTGAAACAAGTCAGCAGAGCTCCATGCCTGCCCTGATCATCATCAATAATGTGTGA

Related Sequences

bmy_13023T0 Protein

Length: 1407 aa     
>bmy_13023T0
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLSHLSFAELLKPFSRLTSEVHMRDPNNQLHVIKNLKIAVSNIITQPPQPGAIRKLLNDVVSGSQPAEGLVANVITAGDYDLNISGMLVASSSEAEPMEQFXKLSQEQHRIQHNNDYSYPKWFIPNTLKYYVLLHDVSAGDEQRAESIYEEMKQKYGTQGCYLLKINSRTPNRASDEQIPDPWSQYLQKNSIQNQESYEDGPCTITSNKNSDSNLLSLDGLDNEVKVDGLPNNFRTHPLQLDPSGDSSNNIDGPDHVKSASSLHETKKANAGIIHGACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDICKNMVLAERCVLLSAEILKSQSKYSEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSYTLRQLDNAVSAFRHILINESKQSAAQQGAFLREYLYVYKNVSQLSPDGPLPQLPLPYINSSATRVFFGHDRRPADGEKQAATHVSLDQEYDSESSQQWRELEEHVVAVVNRGVLPSNFHPTEYCLNSYSDNSRFPLTVVEEPITVEVAFRNPLKVPLLLTDLSLLWKFQPKDVSGKENGEVKELVKGEPEMIGTEVVSEFLINSEESKVARLKLFPHHIGELHILGVVYNLGTIQGSMTVDGIGALPGCHTGKHSLSMSVRGRQDLEIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDSTSVCTALISSASSVDFGIGIGSQPEVIPVPLPDTVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKKQPKIRHRILRHTAVICTSRSLNVRATVCRSNSLEDEEGRGGNMLVFVDVENTNTSEAGVKEFHIVQVSSSSKHWKLQKSVNLSENKDAKLANREKGKFCFKAIRCKEEEVATQSSEKYTFADIIFGNEQIVSSASPCADFFYRSLSSELKKPQAQSSRHTEKQSIEDTMRLIQKCNEVDLNIVVLWKAYVVEDSKQLILEGQHHVVLRTIGKEAFSYPQKREPPEMELLKFFRPENTTVSSRPSVEQLSNLIKTSLHYPESFSHPFHQKSLCLVPVTLLLANCSKADVDVIVDLRHKTTSPEALEIHGSFTWLGQTQYKLHLKSQELHSLQLKACFVHTGVYNLGTPRVFAKLSDQVTVFETSQQSSMPALIIINNV*