Sequence details bmy_12601 (Coding sequence)

Part of scaffold_761 (Scaffold)

For more information consult the page for scaffold_761 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTBP3 ENSTTRG00000009283 (Bottlenosed dolphin)

Gene Details

polypyrimidine tract binding protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008799, Bottlenosed dolphin)

Protein Percentage 92.12%
cDNA percentage 93.99%
Ka/Ks Ratio 0.81881 (Ka = 0.0601, Ks = 0.0734)

PTBP3 ENSBTAG00000016750 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022272, Cow)

Protein Percentage 98.02%
cDNA percentage 96.11%
Ka/Ks Ratio 0.07161 (Ka = 0.0093, Ks = 0.1294)

Additional orthologs identified in other species via the OPTIC pipeline.

PTBP3 (Human)  

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location:538516..471338   Strand:-
Raw sequence 
>bmy_12601
ATGGCTTCTGAGGAAGCTGCTGTTACTATGGTGAATTATTACACTCCTGTTACTCCTCACCTTCGAAGCCAGCCTGTTTTTATTCAGTATTCCAATCACAGAGAACTTAAGACTGACAATCTACCTAATCAAGCTAGAGCCCAAGCTGCACTGCAGGCTGTCAGTGCTGTCCAGTCAGGAAGTCTGGCCCTTCCTGGAGCTCCTGCTAATGAAGGCACAGTCCTACATGGGCAGAGCCCTGTGCTCCGAATAATTATTGAAAACCTCTTTTATCCTGTTACCCTGGAAGTTCTTCATCAGATATTTTCTAAATTTGGCACAGTCYTAAAGATTATCACCTTTACAAAGAATAATCAGTTTCAAGCCTTGCTTCAGTATGCTGACCCATTGAATGCACATTATGCCAAAATGGCTCTGGATGGCCAGAATATCTATAATGCATGCTGCACTCTGCGTATTGACTTCTCCAAGCTTACCAGCCTTAATGTGAAATATAATAATGACAAAAGCAGAGACTTCACTCGCTTAGACCTTCCTACTGGTGATGGCCAGCCATCCCTTGAACCCCCTATGGCTTTTGATCTTTTTACTCTTCCATTGGGCATATCTACAGTAAGCTTCTCTTCCCCGTTAGGTGCACCAGGAATAATTTCCTCACCATATGCAGGGGCTGCTGGATTTGCCCCAGCCATTGGATTTCCTCAAGCTACAGGTCTGTCAGTCCCAGCTGGACTAGGTCCCGGAGCTCTTGGTCCTCTCACAATCACCTCCTCTGCTGTCACTGGAAGGATGGCCATTCCTGGGGCTGGTGGTATACCGGGAAATTCTGTTCTACTTGTCACCAATCTTAATCCTGATCTTATTACACCACATGGACTTTTTATCCTATTTGGAGTATATGGTGATGTACATCGAGTGAAGATAATGTTTAATAAGAAAGAAAATGCATTGGTTCAGATGGCAGATGCAAATCAAGCTCAGCTAGCAATGAACCATCTGAGTGGTCAGAGACTTTATGGGAAAGTGCTTCGTGCTACACTGTCCAAACATCAAGCAGTTCAGCTTCCTCGAGAGGGACAAGAAGACCAAGGTCTGACTAAGGATTTTAGCAATAGTCCTTTGCATCGCTTTAAAAAGCCTGGCTCTAAAAACTTCCAGAATATTTTTCCACCATCAGCTACTCTGCATCTTTCCAACATCCCCCCCTCTGTTACAGTAGATGATCTGAAGAACCTTTTCACAGAAGCCGGATGTTCAGTGAAGGCTTTTAAATTCTTTCAGAAAGATCGCAAAATGGCACTCATTCAGTTGGGATCTGTGGARGAAGCAATCCAGGCTCTCATTGAACTTCATAACCATGACCTTGGAGAAAATCACCACCTCAGAGTTTCCTTCTCAAAATCTACAATCTAA

Related Sequences

bmy_12601T0 Protein

Length: 471 aa      View alignments
>bmy_12601T0
MASEEAAVTMVNYYTPVTPHLRSQPVFIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGSLALPGAPANEGTVLHGQSPVLRIIIENLFYPVTLEVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPLNAHYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFTRLDLPTGDGQPSLEPPMAFDLFTLPLGISTVSFSSPLGAPGIISSPYAGAAGFAPAIGFPQATGLSVPAGLGPGALGPLTITSSAVTGRMAIPGAGGIPGNSVLLVTNLNPDLITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI*