Sequence details bmy_11998 (Coding sequence)

Part of scaffold_687 (Scaffold)

For more information consult the page for scaffold_687 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPP1R42 ENSTTRG00000017151 (Bottlenosed dolphin)

Gene Details

protein phosphatase 1, regulatory subunit 42

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016257, Bottlenosed dolphin)

Protein Percentage 77.65%
cDNA percentage 82.87%
Ka/Ks Ratio 0.99834 (Ka = 0.2035, Ks = 0.2039)

PPP1R42  (Minke Whale)

Gene Details

protein phosphatase 1, regulatory subunit 42

External Links

Gene match (Identifier: BACU020542, Minke Whale)

Protein Percentage 79.33%
cDNA percentage 84.36%
Ka/Ks Ratio 0.98278 (Ka = 0.1807, Ks = 0.1839)

Additional orthologs identified in other species via the OPTIC pipeline.

BT.42457 (Cow)   PPP1R42 (Human)   Ppp1r42 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 540 bp    Location:497564..479723   Strand:-
Raw sequence 
>bmy_11998
ATGGTTCGACTGACCTTGGATCTAATTGCCAAAAAGAGCAATCTTAAACCCCGAAAAGAAGAAACCACTTTACAATACCTGAAGAAAATAACTCATATAAATTTTTCAGCCAAAAATATAGATGCAATTGAAGACCTCTCTCTKTGCAAAAATCTTAGTGTTTTATATTTGTATGATAACTGTATTAGTCAAATCACTAACCTGAATTATGCCACAAATYTGACCCACTTATACCTACAAAACAATTGTATTTCATGTATAGAGAACCTCGGGTCATTAAAGAAACTGGAAAAACTTATTATTAGTACTAAATAWATTGTTATACATAAATCCCTCTCTATATTGAATATCAGCAATAATAATATTGATGACATAAGAGACTTAGAAATACTGGAGAATCTTAATCAGCTCATAGCAGTTGACAACGAACTTCTGCATGTGAAGGTAAGTTGCCCAAAAGCTGCTGACATCAAACCCTGCGCCATGGGAGAGAAAGCTCAATGTGCCATACATAAAGTCGCTGACATCCATCCTAACTAA

Related Sequences

bmy_11998T0 Protein

Length: 180 aa      
>bmy_11998T0
MVRLTLDLIAKKSNLKPRKEETTLQYLKKITHINFSAKNIDAIEDLSLCKNLSVLYLYDNCISQITNLNYATNLTHLYLQNNCISCIENLGSLKKLEKLIISTKXIVIHKSLSILNISNNNIDDIRDLEILENLNQLIAVDNELLHVKVSCPKAADIKPCAMGEKAQCAIHKVADIHPN*