Sequence details bmy_11170 (Coding sequence)

Part of scaffold_602 (Scaffold)

For more information consult the page for scaffold_602 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MAP1LC3C ENSBTAG00000012462 (Cow)

Gene Details

microtubule-associated proteins 1A/1B light chain 3C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016532, Cow)

Protein Percentage 81.0%
cDNA percentage 87.33%
Ka/Ks Ratio 0.39352 (Ka = 0.1111, Ks = 0.2823)

Additional orthologs identified in other species via the OPTIC pipeline.

MAP1LC3C (Human)  

Genome Location

Sequence Coding sequence

Length: 315 bp    Location:484311..483242   Strand:-
Raw sequence 
>bmy_11170
ATGCTCCTGCCGTCACTGGACAAGACCAAGTTCCTAGTCACACAGGAGCTGACCATGACCCAGTTCCTCAGTGTCATCCGGAGCCGCATGGTCCTAGGGGCCACTGAAGCCTTTTACTTGCTGGTGAACAACAGGAGCTTCGGAGGTATGAATGTGACCATGGCAGAGATCTACAGGGACTACAAGGATGAGGATGGCTTCGTGTACGTGACCTATGCCTCCCAGATGTTTGGCTGCTTGGGGTCAGCAGCCCCCAAGGATGGGAGCAGCCTTGGGGGGCAGGCCCTGCTATCCTCTATAACACGTATCCTCTAA

Related Sequences

bmy_11170T0 Protein

Length: 105 aa      
>bmy_11170T0
MLLPSLDKTKFLVTQELTMTQFLSVIRSRMVLGATEAFYLLVNNRSFGGMNVTMAEIYRDYKDEDGFVYVTYASQMFGCLGSAAPKDGSSLGGQALLSSITRIL*