Part of scaffold_573 (Scaffold)

For more information consult the page for scaffold_573 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPM1D ENSTTRG00000004516 (Bottlenosed dolphin)

Gene Details

protein phosphatase, Mg2+/Mn2+ dependent, 1D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004251, Bottlenosed dolphin)

Protein Percentage 91.74%
cDNA percentage 91.83%
Ka/Ks Ratio 0.32675 (Ka = 0.0083, Ks = 0.0253)

PPM1D ENSBTAG00000009427 (Cow)

Gene Details

protein phosphatase 1D

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012404, Cow)

Protein Percentage 95.44%
cDNA percentage 94.11%
Ka/Ks Ratio 0.1311 (Ka = 0.0231, Ks = 0.176)

PPM1D  (Minke Whale)

Gene Details

protein phosphatase, Mg2+/Mn2+ dependent, 1D

External Links

Gene match (Identifier: BACU013991, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.72%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0115)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1056 bp    Location:211149..236134   Strand:+
>bmy_10825
ATGAACAAGTCTGGGGTGAATCGTGTAGTTTGGAAACGACCTCGGCTCACTCACAACGGACCTGTGAGAAGGAGCACAGTCATTGACCAGATTCCATTTCTGGCAGTAGCAAGAGCACTTGACACAAGTGTCCATACTCTTGATCCCCAGAAGCACAAGTATATTATCTTGGGGAGTGATGGACTTTGGAATATGATTCCACCTCAAGATGCCATCTCAATGTGCCAGGACCAAGAGGAGAAAAAATACTTGACGGGTGAGCATGGACAGTCTTGTGCCAAAATGCTTGTGAATCGAGCTCTAGGCCGCTGGAGGCAGCGTATGCTTCGAGCAGATAATACTAGTGCCATAGTAATCTGCATCTCTCCAGGAGTGGGCACTCAGGGAGATTTCACCAATGAAGACGAGCTCTATCTGAACCTGACTGATAGCCCTTCCTATAATAGTCAAGAAACCTGCGTGATGACTCCTTCTCCGTGTTCTACACCACCAGTCAAGTCACTGGAGGAGGACCCATGGCCAAGGCTGAACTCTAAGGACCACATACCTGCCCTTGTTCGTAGTAATGCCTTCTCAGAGAATTATTTAGAAGTCCCAGCTGAGATAGCTCGAGGGAATGTCCAGGCTGCAGTCATATCCTCAAAAGATCCAGAGCCACTTGAAGAAAATTGCACTAAAGCCCTGACTTTAAGGATACATGATTCTTTGAATAATAGCCTGTCAGTTGGCCTTGTGCCTACCAATTCAACAAACACCATCGTGGACCAAAAAAATTTAAAGATGTCGATCCCAGGTCAAATGAAAGCTCAAGAAGTTGAAAGAACCCCTCCAACAAACTTCAAAAGGACATTAGAAGAATCCAACTCTGGCCCTCTTGTGAAGAAGCATAGACGAAATGGTTTAAGTCGAAGTAGCGGTGCTCAGCCTGCAAGCCTCCCCACAAACTCACAGCGAAAGAACTCTGTTAAACTTACCATGCGACGCAGACTTAGGGGCCAGAAGAAAATTGGAAATCCTTTACTTCACCAGCACAGAAAAACTGTTTGTGTTTGCTGA

Related Sequences

bmy_10825T0 Protein

Length: 352 aa      View alignments
>bmy_10825T0
MNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISMCQDQEEKKYLTGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPGVGTQGDFTNEDELYLNLTDSPSYNSQETCVMTPSPCSTPPVKSLEEDPWPRLNSKDHIPALVRSNAFSENYLEVPAEIARGNVQAAVISSKDPEPLEENCTKALTLRIHDSLNNSLSVGLVPTNSTNTIVDQKNLKMSIPGQMKAQEVERTPPTNFKRTLEESNSGPLVKKHRRNGLSRSSGAQPASLPTNSQRKNSVKLTMRRRLRGQKKIGNPLLHQHRKTVCVC*