Part of scaffold_431 (Scaffold)

For more information consult the page for scaffold_431 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYCE1L ENSTTRG00000013613 (Bottlenosed dolphin)

Gene Details

synaptonemal complex central element protein 1-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012917, Bottlenosed dolphin)

Protein Percentage 70.06%
cDNA percentage 71.86%
Ka/Ks Ratio 0.31201 (Ka = 0.1618, Ks = 0.5187)

SYCE1L ENSBTAG00000023780 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022507, Cow)

Protein Percentage 71.08%
cDNA percentage 79.72%
Ka/Ks Ratio 0.4937 (Ka = 0.2141, Ks = 0.4336)

SYCE1L  (Minke Whale)

Gene Details

synaptonemal complex central element protein 1-like

External Links

Gene match (Identifier: BACU020102, Minke Whale)

Protein Percentage 81.1%
cDNA percentage 84.55%
Ka/Ks Ratio 0.35333 (Ka = 0.136, Ks = 0.3849)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 615 bp    Location:924120..1007520   Strand:+
>bmy_09042
AGACGCACTAGACGCGTGCGCGCTGCACAGCCTATCCGCCCCCGCGTGATTTTTTTTTTTTTAAACCAATCATCGTCCAAAGCGCAGTCGCGCCAGCCGTGCGTGCGTTGGAAAATGGCGGGGAAGTTGGAACCTTCGGAAGTGGCGCCGCTGGAAGTGCTTGACGAGGCTGAAGGTCAGACCAAGTCTTCAAAGAAGACTGAAGAGTTGCTGGAAATGGTGAAGAAGCTGCAGAAAGAGGGAAGCCTGGAGCCACAGGTCGAAGACCTGATTAACCGGATTAATGAGCTTCAGCAAGCAAAGAAGAAATCCGGCGAGGAACTGGGAGAAGCCCAAGCTCTCTGGGAGGCCCTGCTGAATGGAGAGAAAGTGCACCTGGAAGAGGTTTTGAGCAAAAAGCAAGAGAGGCAGGCGCGGGCCAAGCTGGAGACGGTGGAGCGGCGGCTGCGCTCGCCGCCTGAGGTCCAGAGCGCCCCGGCAGAGAAAGACGGGCTGAAGGCGGAGCTGGAGAAACTCGGGGGGCAGGTCCCCGCCCAGACCCAGACCACCCCAGAGGACCGGGCCGGAGAGGTACCATTTGTTGAGTATTACGATGGGTCAGGATCTCCCACGTAG

Related Sequences

bmy_09042T0 Protein

Length: 205 aa      View alignments
>bmy_09042T0
RRTRRVRAAQPIRPRVIFFFLNQSSSKAQSRQPCVRWKMAGKLEPSEVAPLEVLDEAEGQTKSSKKTEELLEMVKKLQKEGSLEPQVEDLINRINELQQAKKKSGEELGEAQALWEALLNGEKVHLEEVLSKKQERQARAKLETVERRLRSPPEVQSAPAEKDGLKAELEKLGGQVPAQTQTTPEDRAGEVPFVEYYDGSGSPT*