Sequence details bmy_08628 (Coding sequence)

Part of scaffold_383 (Scaffold)

For more information consult the page for scaffold_383 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPAIN ENSTTRG00000014739 (Bottlenosed dolphin)

Gene Details

RPA interacting protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013978, Bottlenosed dolphin)

Protein Percentage 94.37%
cDNA percentage 96.95%
Ka/Ks Ratio 0.67929 (Ka = 0.0199, Ks = 0.0293)

RPAIN ENSBTAG00000025149 (Cow)

Gene Details

RPA-interacting protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035090, Cow)

Protein Percentage 88.03%
cDNA percentage 92.72%
Ka/Ks Ratio 0.43899 (Ka = 0.0543, Ks = 0.1238)

RPAIN  (Minke Whale)

Gene Details

RPA interacting protein

External Links

Gene match (Identifier: BACU020237, Minke Whale)

Protein Percentage 97.18%
cDNA percentage 98.36%
Ka/Ks Ratio 0.96575 (Ka = 0.0073, Ks = 0.0076)

Additional orthologs identified in other species via the OPTIC pipeline.

RPAIN (Human)   Rpain (Mouse)  

Genome Location

Sequence Coding sequence

Length: 429 bp    Location:689672..683578   Strand:-
Raw sequence 
>bmy_08628
ATGGCRGAGGGATCAGGGTCTCGGCGTCGCTCGCTGTATAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCAGGCAGGGATGCCTGGAGAGAATGAGAAAGAGCCGGGACAGGCTCCTGAACAGRTATCGGCAGGCTGGAGGCAATATGTCAGGAGGACCTCAGAACACCTTTCTAGTGCAGGAGGTGATGGAAGAAGAGTGGAATGCTTTGCAGTCGGTGGAGAGCTGGCCAGAGGCCTTGGCTCAGTTGGAGGAGCCGCTGGACCTGGCCGTGCTGGAGGAAATCCAACAGGAGCTGATTGATCAAGAACAGTCCATCATCAGTGAGTACGAGAAGAGCTTGCAGTTTGATGAAGAGTGTCTCAGCGTCATGCTGGCTGAGTGGSAAGCAAACTCCCTCATCTGTCCTGTGTGTACAAAGTAA

Related Sequences

bmy_08628T0 Protein

Length: 143 aa      View alignments
>bmy_08628T0
MAEGSGSRRRSLYKLVGSPPWKEAFRQGCLERMRKSRDRLLNRYRQAGGNMSGGPQNTFLVQEVMEEEWNALQSVESWPEALAQLEEPLDLAVLEEIQQELIDQEQSIISEYEKSLQFDEECLSVMLAEWZANSLICPVCTK*