Sequence details bmy_08397 (Coding sequence)

Part of scaffold_364 (Scaffold)

For more information consult the page for scaffold_364 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDHR2 ENSTTRG00000014035 (Bottlenosed dolphin)

Gene Details

cadherin-related family member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013324, Bottlenosed dolphin)

Protein Percentage 91.43%
cDNA percentage 94.85%
Ka/Ks Ratio 0.46359 (Ka = 0.0441, Ks = 0.0951)

CDHR2 ENSBTAG00000025340 (Cow)

Gene Details

cadherin-related family member 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035423, Cow)

Protein Percentage 83.2%
cDNA percentage 87.41%
Ka/Ks Ratio 0.26463 (Ka = 0.0944, Ks = 0.3567)

CDHR2  (Minke Whale)

Gene Details

cadherin-related family member 2

External Links

Gene match (Identifier: BACU002865, Minke Whale)

Protein Percentage 93.9%
cDNA percentage 95.85%
Ka/Ks Ratio 0.43953 (Ka = 0.0345, Ks = 0.0786)

Additional orthologs identified in other species via the OPTIC pipeline.

CDHR2 (Human)   Cdhr2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3555 bp    Location:1016489..958239   Strand:-
Raw sequence 
>bmy_08397
ATGCTGGTCGGGTCGGCGGCTGCTGGGAGGGTCCCTCCAGACATGATGGTGTGGCCGTGGCTGTCCTGCCTCTTGCTTCCTGCCCTCATGGTGTCCGTGGCAGCCAACATGGCCCCAACATTCCTGTCCAACATGTCGGCAGTGAACCTGCCCGAGGACCTACCAGTGGGTGCTGAGGTCTTCTGGCTGGTAGCTCAGGACCAGGACAATGACCCTCTGACCTATGGGATTAGTGGCTCCTATGACTACTTTAATGTCACCCCGAATACTGGGGAAGTGAAGCTGGCCAAACTTCTGGACTATGAGACGCTCTACTGGTTTGCCATCAACATCTTTGCGAGCGACGGTCACAACAACCCAGTGCAGATGGAAATGCAGGTGATCGTGGAGGACAGAAATGACAACGCACCCATTTTCCAGAACACAGACTTCTCCACCAGCATCAGTGAGACCCTGCCGGTTGGCTCCCTGTTGCTCTCTGTGCTGGCCACGGACAAAGACACGGGGTCCGGAGGTGCAGTGGTGTACTCCATAGAGAAGGTCATCCCTAGCACGGACAGCAGCGAGTACCTCTTCAAGATCCTGCCCAACGGCTCCATCATCCTCAATGGCAGCCTCAGTTACAACAACAAGAGTGCCTTCTATCAGCTGGAGCTGAAGGCCTGTGACTCAGGCGGCACGTACAACAACAGCATCGTCGTCCAGTGCTCCTCGCCTGTCTTCGTGTCCATCTTTGTAATCGACAAGCGGGACCTGGATCCCCAGTTTGTCAGGGAGTTTTACTCAGCCTCTGTTGCTGAGGATGCACCCCAGGGAACCTCGGTGCTGAAGGTGGAGGCCGTGGATGGCGACAGAGGCATCAATGACCCTGTGATCTACAGCATCTCCAACTCCACAAGGCCTGGCTGGTTCGACATTGGACCAGACGGGGTGATCAGGGTCAGCGGTTCCCTGGACAGAGAGCAGCTGCTGGAGGAGGACGAGGAGGTGCAGGTGCAGGTCACGGCCACCGAGATGCACCCCAACGTCTATGGGCAGGAGGCCAAGGTGAGCATATGGGTCACGCTGAGAGTGACAGACGTCAATGACCACAAACCTGAGTTTTACAACTGCAGCCTCCCAACCTGCACCTTCACCCCCCAAGAGGCTCAAGTCAACTTCACTGGCTACGTGGACGAGCACGCCTCCACCCGCATCCCCATCGATGACCTAACCATGGTGGTCTACGACCCAGACAAGGCAGGGGCACCCAGACCATGCGCGGCATGGGTGGAAGTGATGGGCAGCAATGGCACCTTCCTGCTATCCCTGGGGGGCCCTGATGTTGAAGCCTTCAGCGTCTCCCCGGAGCGGGCGGTGGGCTCAGTGGATGTGCAGGTGCTGGTGAGAGCACCGTCGCTGGTGGACTACGAGACACAAACGGTGATGCTGGTGCAGGTCGTGGCGACTGACTCGGTCAGCAGAAGCTCCTCGGTAGCCTTGGTGACCATCCACCTTAGAGACATTAATGATCACAGGCCCACATTCCCCCACAACCTGTACAACCTCAGTGTCTTCGAGCACAGTGCGGTCGGCTATGTGGTCACCAACGGCATCCGAGCCTCTGACCCAGACACGGGCGAGGGGGGCCGCATCACCTACAGCCTGCTTCCGGGGAATGGATCTGCTGCCAGAACCATGGTGCCCAGTGTGAGCCCTGAGAAGTGCTTGGCTCACGACGATGACCAGCCAGGCACCAACCACAGCCTTCTGCACTTCAGCCTGCTGAGCAGCCCCTACAGCCACAACTTCTCAGTGGACCCCGACAAAGGGATCCTCAGAAACCTGGGGCCCTTGGACCGAGAGGCCATCAACCCCACCCTGGGGGGCCGCATCGTGCTGACCGTGCGCGTGTCTGATTGTGGCGAGCCTGCCCTCTGGACTGACGTCAATGTCACCATCACTGTGGAGGACATCAATGATAATCTGCCCATCTTCAACCAGTCCAGCTATTCCTTCTCAGTGAGGGAGAGGGACCCAGGAGTGCTGGTGGGCGTGGTGGAGGCCTGGGATGCAGACCAAACGGAAGCCAACAACCGCATCAGCTTCAGCCTATCAGGGGGCGGTGCCAACAACTTCTTGCTCCGAGGCTTGGTGCTGGGGTCTGGGCGGGCAGAGGGCCACCTCTTGCTGCCCTCGGACGTGAGCCTGGACTATGAGACACAGGACTCCTTCAGTCTGACAGTGAGTGCTGAGAACCCAGACCCCCAGGGGCGTGACGCCACAGCAAAAGTCCTTGTGAATGTGGAGGACGTGAATGACGTGCCACCCACCCTGGACTCAACCTCGCTCCAGGGCATCCGTGTGGCTGAGAATGGCTCGCAGCACGGTATAGTGGCTGAGGTGGTGGCCCAGGACAGGGACACCATGTCCCAGGTGGAGGTACAGCTTGTGAACGTCATCTGTACCAAGGCCGGGGTCGACGTGGGCAGTCTGTGCCACGGCTGGTTCTCTGTGCTGGCCAACGGCTCTGTGTTCATCAATCAGAGAAGCCTCCCCATCACCATTGAGGATGTGAATGACAATGCACCCTACTTTCTGCCTGAGAATAAGACTTTTGGCACTTACCAAGTGACGGTCAAGGCCCAGGACAGGCCTTCTGAGGGTCCTGCCCAGGAAGCCAAAATCACCCTAAATCTCTTCACTGTGGACCAGAGCTACCGTGTGAGGCTGCAGTTCTCCATGAGCAAGGAGGAGGTTGGCGCCAACACGGAAGAGATTAAGGCGACTCTTGTCCAGGCGACCAGGACTACTGTCTACATTGTGAACATTCAGGACATAGAATCCATGGCTCGGGCCCGAGGCCGTTCCTACCTCGATGCCTACTTTGTCTTCTCAAATGGGTCGGCCTTGACCGTTGACCAGCTGAGTGTGACGATCCGGAATGACGAGGACTCCCTGACCAAGCTGCTGCAGCTGGGGCTGGTGGTGCTGGGCTCCCAGGAGAGGCAGAAGTCAGAGTTGTCGGACACGCTCCGTAACACCATCATAGGATTGGGAGTGGCTTTGCTGCTGGTCATCGTGATCATGACCACGGTCCTCGTGTGTACCCAGAAGAGCTACCACCGGAAACTTCGGGCTATGAAGGCTTCCAAGGAGGCCCGGAAGACAGCGGCGGGGGTGATGCCCCCAGTCTCTGCCATCCCCGGGACTAACGTGTACAACACTGAGCGTGCCAATCCCGTGCTGAACCTCCCCACCAAGGACCTGGGCTTCGAGTCCCAATCTTCCTCCAGTGACTTGGACCACATCAGCCTCAACTCCCTGGATGACAACTCTGTGGATCTGGAAAATAGCAGGCAGGAAACCAAGGCAAGATGGGGGATGAGTTGGTGCCTGGGGCTTCTGACTTGGGGCTCTTCTCTGAAGGAGTGGAAGGAGCCCCTGCACAGTCTGATGGGGCCGGATCCAGAGCCCCTGAACACAGTGCTGTCAGGAATGAAGGCGGGCACACGTGGACAGCAGGAGGAGAAGCTGGCCTTCACCAACCCCGGCCTGAATACCACAGACCTGTGA

Related Sequences

bmy_08397T0 Protein

Length: 1185 aa      View alignments
>bmy_08397T0
MLVGSAAAGRVPPDMMVWPWLSCLLLPALMVSVAANMAPTFLSNMSAVNLPEDLPVGAEVFWLVAQDQDNDPLTYGISGSYDYFNVTPNTGEVKLAKLLDYETLYWFAINIFASDGHNNPVQMEMQVIVEDRNDNAPIFQNTDFSTSISETLPVGSLLLSVLATDKDTGSGGAVVYSIEKVIPSTDSSEYLFKILPNGSIILNGSLSYNNKSAFYQLELKACDSGGTYNNSIVVQCSSPVFVSIFVIDKRDLDPQFVREFYSASVAEDAPQGTSVLKVEAVDGDRGINDPVIYSISNSTRPGWFDIGPDGVIRVSGSLDREQLLEEDEEVQVQVTATEMHPNVYGQEAKVSIWVTLRVTDVNDHKPEFYNCSLPTCTFTPQEAQVNFTGYVDEHASTRIPIDDLTMVVYDPDKAGAPRPCAAWVEVMGSNGTFLLSLGGPDVEAFSVSPERAVGSVDVQVLVRAPSLVDYETQTVMLVQVVATDSVSRSSSVALVTIHLRDINDHRPTFPHNLYNLSVFEHSAVGYVVTNGIRASDPDTGEGGRITYSLLPGNGSAARTMVPSVSPEKCLAHDDDQPGTNHSLLHFSLLSSPYSHNFSVDPDKGILRNLGPLDREAINPTLGGRIVLTVRVSDCGEPALWTDVNVTITVEDINDNLPIFNQSSYSFSVRERDPGVLVGVVEAWDADQTEANNRISFSLSGGGANNFLLRGLVLGSGRAEGHLLLPSDVSLDYETQDSFSLTVSAENPDPQGRDATAKVLVNVEDVNDVPPTLDSTSLQGIRVAENGSQHGIVAEVVAQDRDTMSQVEVQLVNVICTKAGVDVGSLCHGWFSVLANGSVFINQRSLPITIEDVNDNAPYFLPENKTFGTYQVTVKAQDRPSEGPAQEAKITLNLFTVDQSYRVRLQFSMSKEEVGANTEEIKATLVQATRTTVYIVNIQDIESMARARGRSYLDAYFVFSNGSALTVDQLSVTIRNDEDSLTKLLQLGLVVLGSQERQKSELSDTLRNTIIGLGVALLLVIVIMTTVLVCTQKSYHRKLRAMKASKEARKTAAGVMPPVSAIPGTNVYNTERANPVLNLPTKDLGFESQSSSSDLDHISLNSLDDNSVDLENSRQETKARWGMSWCLGLLTWGSSLKEWKEPLHSLMGPDPEPLNTVLSGMKAGTRGQQEEKLAFTNPGLNTTDL*