Part of scaffold_307 (Scaffold)

For more information consult the page for scaffold_307 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SQLE ENSTTRG00000015495 (Bottlenosed dolphin)

Gene Details

squalene epoxidase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014676, Bottlenosed dolphin)

Protein Percentage 82.64%
cDNA percentage 82.15%
Ka/Ks Ratio 0.07818 (Ka = 0.0036, Ks = 0.0462)

SQLE ENSBTAG00000005498 (Cow)

Gene Details

squalene monooxygenase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007228, Cow)

Protein Percentage 93.71%
cDNA percentage 93.57%
Ka/Ks Ratio 0.13988 (Ka = 0.0251, Ks = 0.1796)

SQLE  (Minke Whale)

Gene Details

squalene epoxidase

External Links

Gene match (Identifier: BACU013234, Minke Whale)

Protein Percentage 98.75%
cDNA percentage 98.89%
Ka/Ks Ratio 0.037 (Ka = 0.001, Ks = 0.0266)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1440 bp    Location:145759..169655   Strand:+
>bmy_07433
ATGTGGACTTTTCTTGGCATTGCCACTTTCACCTATTTTTATAAGAAATGCGGAGACTTCGTGTCTCTGGCCAACAAGGAGCTCTTGCTGTGCGTGCTGGTGTTCCTGTCGCTGGGGCTGGTGCTGTCCTATCGTTGTCGCTACCGGAACGGGGCCCTCCTCGGGCGCCGGCAGAGCGGCTCCCAGTTCGCGGTCTTCTCGGATATTCTCTCAGCCTTGCCTTTCATTGGCTTCTTCTGGGCTAAATCCCCCCCCGGATCAGAAAATAAAGAGCAGCTCGGGTCTAGGAGGTGCAAAAAAGGAACCAGTATTTCAGAAACAACCTTARTAGGAGCAACTGCCTCTACGTTGWTATCTTCTCAAAATGATCCAGAAATTATCATCGTGGGATCTGGTGTACTCGGCTCTGCTTTGGCGGCAGTGCTTTCCAGAGATGGAAGAAAGGTGACAGTAATTGAGAGAGATTTAAAAGAGCCTGACAGGATACTTGGAGAATTTCTGCAGCCAGGTGGTTATCATGTCCTTAAAGACCTGGGTCTTGAAGATACAGTGGAAGGTATTGATGCCCAGGTTGTAAATGGCTACATAATTCATGATCAGGAGAGCAAATCAGAGGTTCAGATTCCTTTCCCTCTGTCAGAAAACAGTCATGTGCAGAGTGGAAGAGCTTTCCATCATGGAAGGTTCATCATGAGTCTCCGGAAAGCAGCTATGGCAGAGCCCAACACAAAGTTTATTGAGGGCACTGTGCTGCAGTTACTAGAAGAAGATGATGCTGTGATGGGAGTTCAGTACAGGGATAAAGAGACTGGAGACATCAAGGAACTCCATGCTCCATTGACCGTTGTTGCAGATGGACTTTTTTCCAAGTTCAGGAAAAACCTGATTGCCAATAAAGTTTCCGTTTCTTCACATTTTGTTGGCTTCCTTATGAAGAATGCACCACAGTTTAAAGCAAATCATGCTGAACTTATTTTAGCTAATCCGAGTCCAGTTCTCATCTACCAGATTTCACCTAATGAAACTCGAGTACTTGTTGACATCCGAGGAGAAATGCCAAGGAATTTAAGAGAATACATGACTGAAAACATTTACCCACAATTACCTGGTGTTCTTCTTTTGGGAGATGCATATAACATGAGGCATCCTCTTACTGGAGGAGGAATGACTGTTGTTTTTAATGATATAAAACTATGGAGAARATTGCTAAAGRGTATCCCTGACCTTTATGATGATGCARCTGTTTTCCAGGCCAAAAAATCATTCTATTGGACAAGAAAAACGTCTCATTCCTTTGTTGTGAATATCCTTGCTCAGGCTCTTTATGAATTATTTTCTGCCACAGATGATTCCCTACATCAACTAAGAAAAGCGTGTTTTCTTTATTTCAAACTTGGTGGAGAATGTGTTGCTGGTCCAGTTGGGCTGCTTTCTGTGTAA

Related Sequences

bmy_07433T0 Protein

Length: 480 aa      View alignments
>bmy_07433T0
MWTFLGIATFTYFYKKCGDFVSLANKELLLCVLVFLSLGLVLSYRCRYRNGALLGRRQSGSQFAVFSDILSALPFIGFFWAKSPPGSENKEQLGSRRCKKGTSISETTLXGATASTLJSSQNDPEIIIVGSGVLGSALAAVLSRDGRKVTVIERDLKEPDRILGEFLQPGGYHVLKDLGLEDTVEGIDAQVVNGYIIHDQESKSEVQIPFPLSENSHVQSGRAFHHGRFIMSLRKAAMAEPNTKFIEGTVLQLLEEDDAVMGVQYRDKETGDIKELHAPLTVVADGLFSKFRKNLIANKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISPNETRVLVDIRGEMPRNLREYMTENIYPQLPGVLLLGDAYNMRHPLTGGGMTVVFNDIKLWRXLLKXIPDLYDDAXVFQAKKSFYWTRKTSHSFVVNILAQALYELFSATDDSLHQLRKACFLYFKLGGECVAGPVGLLSV*