Sequence details bmy_07112 (Coding sequence)

Part of scaffold_283 (Scaffold)

For more information consult the page for scaffold_283 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NDP ENSTTRG00000009164 (Bottlenosed dolphin)

Gene Details

Norrie disease (pseudoglioma)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008679, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.4%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0371)

NDP ENSBTAG00000012623 (Cow)

Gene Details

Norrin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016757, Cow)

Protein Percentage 99.1%
cDNA percentage 96.4%
Ka/Ks Ratio 0.01945 (Ka = 0.0037, Ks = 0.1913)

NDP  (Minke Whale)

Gene Details

Norrie disease (pseudoglioma)

External Links

Gene match (Identifier: BACU008456, Minke Whale)

Protein Percentage 99.1%
cDNA percentage 99.4%
Ka/Ks Ratio 0.20364 (Ka = 0.0036, Ks = 0.0178)

Additional orthologs identified in other species via the OPTIC pipeline.

NDP (Human)   Ndp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 336 bp    Location:471197..459357   Strand:-
Raw sequence 
>bmy_07112
ATGGGAGATACAGACAGCTCATTCATGATGGACTCCGATCCTCGACGCTGCATGAGGCACCACTATGTCGATTCTATCAGTCACCCGTTGTACAAGTGTAGCTCCAAGATGGTACTCCTGGCCCGGTGCGAGGGGCACTGCAGCCAGGCGTCACGCTCCGAGCCCTTGGTCTCCTTCAGCACTGTCCTCAAGCAGCCCTTCCGTTCCTCCTGTCACTGCTGCCGGCCCCAGACGTCCAAGCTGAAGGCACTGCGGCTGCGCTGCTCTGGGGGCATGCGACTCACGGCCACCTACCGGTACATCCTCTCCTGTCACTGCGAGGAGTGCAGCTCCTGA

Related Sequences

bmy_07112T0 Protein

Length: 112 aa      View alignments
>bmy_07112T0
MGDTDSSFMMDSDPRRCMRHHYVDSISHPLYKCSSKMVLLARCEGHCSQASRSEPLVSFSTVLKQPFRSSCHCCRPQTSKLKALRLRCSGGMRLTATYRYILSCHCEECSS*