Sequence detailsbmy_06862 (Coding sequence)

Part of scaffold_268 (SequenceType object (1))

For more information consult the page for scaffold_268 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAM1ENSTTRG00000000328 (Bottlenosed dolphin)

Gene Details

translocation associated membrane protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000307, Bottlenosed dolphin)

Protein Percentage 99.4%
cDNA percentage 98.8%
Ka/Ks Ratio 0.07572 (Ka = 0.0028, Ks = 0.0364)

TRAM1ENSBTAG00000007562 (Cow)

Gene Details

translocating chain-associated membrane protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009951, Cow)

Protein Percentage 98.13%
cDNA percentage 96.35%
Ka/Ks Ratio 0.07466 (Ka = 0.0088, Ks = 0.1184)

TRAM1 (Minke Whale)

Gene Details

translocation associated membrane protein 1

External Links

Gene match (Identifier: BACU011132, Minke Whale)

Protein Percentage 91.71%
cDNA percentage 92.96%
Ka/Ks Ratio 0.55757 (Ka = 0.0628, Ks = 0.1127)

Additional orthologs identified in other species via the OPTIC pipeline.

TRAM1 (Human)   Tram1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1125 bp    Location:552145..523978   Strand:-
Raw sequence 
>bmy_06862
ATGGCGATTCGCAAGAAGAGCACCAAGAGCCCCCCGGTCCTGAGCCACGAATTCGTCCTGCAGAATCACGCGGACATCGTCTCCTGTGTGGCGATGGTCTTCTTGCTGGGGCTCATGTTCGAGATAACAGCAAAAGCTTCTATAATTTTTGTTACTCTTCAGTACAATGTTACCCTCCCTGCAACAGAAGAACAAGCTACTGAATCAGCGTTCCTTTATTACTATGGTATCAAAGATTTGGCTACAGTTTTCTTCTACATGCTAGTGGCGATAATTATTCATGCCATAATTCAAGAATATGTGTTGGATAAAATTAACAGGCGAATGCACTTTTCCAAAACGAAACACAGCAAGTTTAATGAATCTGGTCAGCTGAGTGCATTCTACCTATTTTCTTGTGTTTGGGGCACATTCATTCTCATATCTGAAAACTATATCTCAGACCCAACTATCTTGTGGAGAGCTTATCCCCATAACCTGATGACATTTCAAATGAAGTTTTTCTACATATCACAGTTGGCATACTGGTTTCATGCTTTTCCTGAACTCTACTTCCAGAAAACCAAAAAAGAGGATATTCCTCGTCAGCTCGTCTACATTGGCCTTTACCTCTTTCACATTGCTGGAGCTTATCTTTTGAACTTGAATCATCTAGGACTTGTTCTTTTGGTGCTGCACTATTTTGTTGAGTTTCTTTTCCACATTTCYCGCCTGTTTTATTTTAGTGATGAAAAGTATCAGAAAGGATTTTCTCTGTGGGCAGTTCTGTTTGTGTTGGGAAGACTTCTGACTTTAATTCTTTCGGTACTCACTGTTGGCTTTGGCCTTGCAAGAGCAGAGAATCAGAAGCTGGATTTCAGTACTGGAAACTTCAATGTGTTGGCTGTTAGAATTGCTGTTCTGGCATCCATTTGCATTACCCAAGCATTCATGATGTGGAAGTTCATTAATTTTCAGCTTCGGAGGTGGAGAGAACATTCTGCTTTTCAGGCACCGACTGTGAAGAAGAAACCAACAGTGACTAAAGGCAGGTCTTCTAGAAAAGGAACAGAAAATGGTGTAAATGGAACAGTAACTTCAAATGGAGCAGACTCTCCGCGGAATAGAAAAGAGAAATCTTCATAA

Related Sequences

bmy_06862T0 SequenceType object (3)

Length: 375 aa      View alignments
>bmy_06862T0
MAIRKKSTKSPPVLSHEFVLQNHADIVSCVAMVFLLGLMFEITAKASIIFVTLQYNVTLPATEEQATESAFLYYYGIKDLATVFFYMLVAIIIHAIIQEYVLDKINRRMHFSKTKHSKFNESGQLSAFYLFSCVWGTFILISENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWFHAFPELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFYFSDEKYQKGFSLWAVLFVLGRLLTLILSVLTVGFGLARAENQKLDFSTGNFNVLAVRIAVLASICITQAFMMWKFINFQLRRWREHSAFQAPTVKKKPTVTKGRSSRKGTENGVNGTVTSNGADSPRNRKEKSS*