Sequence details bmy_06344 (Coding sequence)

Part of scaffold_237 (Scaffold)

For more information consult the page for scaffold_237 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APOA2 ENSTTRG00000009221 (Bottlenosed dolphin)

Gene Details

apolipoprotein A-II

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008741, Bottlenosed dolphin)

Protein Percentage 84.16%
cDNA percentage 92.41%
Ka/Ks Ratio 1.22158 (Ka = 0.0874, Ks = 0.0716)

APOA2 ENSBTAG00000009212 (Cow)

Gene Details

Apolipoprotein A-II Apolipoprotein A-II(1-76)

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012138, Cow)

Protein Percentage 82.0%
cDNA percentage 88.0%
Ka/Ks Ratio 0.40127 (Ka = 0.103, Ks = 0.2567)

Additional orthologs identified in other species via the OPTIC pipeline.

APOA2 (Human)   Apoa2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 312 bp    Location:1424290..1422084   Strand:-
Raw sequence 
>bmy_06344
ATGAAGCTGCTTGCAATGACTGTGCTGCTCCTTACCATCTGTAGCCTTGAAGGGGCTTTGGTTCGGAGACAGGCAGAGGAGCTGAATCTGCAGAGCCTGGTCTCTCAGTACTTCCAGACTGTGACCGACTATGGCAAGGACCTGCTGGAGAAGGCCAAGGGCTCAGAGCTTCAAATCCAGGCCAAGGCCTACTTTGAGAAGGCACAGGAGCAGCTGACGCCCCTGGTCAAGAAGGCTGGAACTGATCTGGTTAACTTCTTGAGCAGTATTATGGACCTCAAAACACAACCTGGTGTCAAGTGCATTGTCTAG

Related Sequences

bmy_06344T0 Protein

Length: 104 aa      View alignments
>bmy_06344T0
MKLLAMTVLLLTICSLEGALVRRQAEELNLQSLVSQYFQTVTDYGKDLLEKAKGSELQIQAKAYFEKAQEQLTPLVKKAGTDLVNFLSSIMDLKTQPGVKCIV*