Sequence details bmy_05598 (Coding sequence)

Part of scaffold_200 (Scaffold)

For more information consult the page for scaffold_200 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

WDSUB1  (Minke Whale)

Gene Details

WD repeat, sterile alpha motif and U-box domain containing 1

External Links

Gene match (Identifier: BACU010066, Minke Whale)

Protein Percentage 86.15%
cDNA percentage 89.32%
Ka/Ks Ratio 0.60309 (Ka = 0.0979, Ks = 0.1624)

Additional orthologs identified in other species via the OPTIC pipeline.

WDSUB1 (Cow)   WDSUB1 (Human)   Wdsub1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 696 bp    Location:1348516..1359025   Strand:+
Raw sequence 
>bmy_05598
ATGGTGAAACTAATTCACACATTAGTGGATCATGATGATGATGTCAACTGCTGTGCCTTTTCCTCTTCCCTCTTGGCCACTTGCTCCTTGGACAAAACAATTCGCCTGTACTCCCTGGGTGACTTCAGTGAATTGCCACACTCTCCATTGAAGTTTCACACCTATGCTGTCCACTGCTGCTGCTTCTCCCCTTCAGGACATATGTTGGCTTCATGTTCAACAGATGGTACCACTGTCTTATGGRATACTCAAAACGGACAGACTTTGGCAGTGATGGAACAGCCCAGTGGTAGCCCCGTGAGGGTTTGCCGGTTTTCCCCAGACTCCACTTGTTTGGTATCAGGGGCAGCTGATGGAACTGTTGTTTTGTGGAATGCACAGTCATACAAGTTATATAGATGTGCTAGTGTTAAGGATGGCTCCTTGGTGGCCTGTGCATTTTCTCCTAATGGAAACCTCTTTGTCACTGGCTCCTCGTGTGGAGATTTAACACTGTGGGATGATAAAATGAGGTGTCTGCATAGTGAAAAAGCACATGATCTTGGAATTACCTGCTGYGATTTTTCTTCACAGCCAGTTTCTGGTGGAGAACAAGGTCTTCAATTCTTTCGACTGGCATCATGTGGTCAGGATTGCCAGATCAAAATTTGGGTTATTTCCTTTACCCATACCTTAGGCACTCAAAGATTTTATTGA

Related Sequences

bmy_05598T0 Protein

Length: 232 aa      
>bmy_05598T0
MVKLIHTLVDHDDDVNCCAFSSSLLATCSLDKTIRLYSLGDFSELPHSPLKFHTYAVHCCCFSPSGHMLASCSTDGTTVLWBTQNGQTLAVMEQPSGSPVRVCRFSPDSTCLVSGAADGTVVLWNAQSYKLYRCASVKDGSLVACAFSPNGNLFVTGSSCGDLTLWDDKMRCLHSEKAHDLGITCCDFSSQPVSGGEQGLQFFRLASCGQDCQIKIWVISFTHTLGTQRFY*