Sequence details bmy_05518 (Coding sequence)

Part of scaffold_198 (Scaffold)

For more information consult the page for scaffold_198 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLEC9A ENSTTRG00000005785 (Bottlenosed dolphin)

Gene Details

C-type lectin domain family 9, member A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005472, Bottlenosed dolphin)

Protein Percentage 45.21%
cDNA percentage 54.61%
Ka/Ks Ratio 0.66765 (Ka = 0.6731, Ks = 1.0081)

CLEC9A ENSBTAG00000009537 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012546, Cow)

Protein Percentage 43.92%
cDNA percentage 53.97%
Ka/Ks Ratio 0.03918 (Ka = 0.5805, Ks = 14.8168)

Additional orthologs identified in other species via the OPTIC pipeline.

CLEC9A (Human)   Clec9a (Mouse)  

Genome Location

Sequence Coding sequence

Length: 573 bp    Location:324322..314643   Strand:-
Raw sequence 
>bmy_05518
ATGCAGGAGGAAGAGACATACACCTCTCTTCAGTGGGATAATCCAGCACCAAACCCTTACCAGAAACATCTGTCTTCCACCAAAAATTCAGGTAACCAGTTCTACTTATTTAGACCAAGACCTTGTGGTTTATGGGTTTTCTTTTTTTCCTGTTCTGTGATGAGCCCAAGGAACATGGTGTCTTGTGACAGTGGTTTTATGTATCTTCTGCATAGGCTCATGAGCAACCTCCATTTTCTTGGGTGTCAAGTTGTTCCAGGTGTCCACTACTGCAATGAAGCAGCAAGAAAAACTCATCCAACGGGACAGAGTACTGCTCAACTTCACACAATGGAAGAGAAACCATGCCCTCCAGATGAAATATTGCCGAACGTTGATGCAGAAGTCTTTCAGTTCAGCTCTCAAATTCTAATTACTTCCGTGGAATCAAAATACCACACTTTATATTTCATGGACTTTATCACTGGCAGCCTGAGGAAGATCAAAAGAAACTATGATCACTGGGTGGGACTGTCTCAGGATGGGTCCAGCCAACCTTGGCTTTGGCAAGACGGCTTGTCTCCTTCCCCTGAT

Related Sequences

bmy_05518T0 Protein

Length: 191 aa      View alignments
>bmy_05518T0
MQEEETYTSLQWDNPAPNPYQKHLSSTKNSGNQFYLFRPRPCGLWVFFFSCSVMSPRNMVSCDSGFMYLLHRLMSNLHFLGCQVVPGVHYCNEAARKTHPTGQSTAQLHTMEEKPCPPDEILPNVDAEVFQFSSQILITSVESKYHTLYFMDFITGSLRKIKRNYDHWVGLSQDGSSQPWLWQDGLSPSPD