Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CKAP5 ENSTTRG00000014121 (Bottlenosed dolphin)

Gene Details

cytoskeleton associated protein 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013397, Bottlenosed dolphin)

Protein Percentage 92.26%
cDNA percentage 92.69%
Ka/Ks Ratio 0.48788 (Ka = 0.0251, Ks = 0.0514)

CKAP5 ENSBTAG00000004448 (Cow)

Gene Details

cytoskeleton-associated protein 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005832, Cow)

Protein Percentage 94.53%
cDNA percentage 93.12%
Ka/Ks Ratio 0.18284 (Ka = 0.0346, Ks = 0.1893)

CKAP5  (Minke Whale)

Gene Details

cytoskeleton associated protein 5

External Links

Gene match (Identifier: BACU008951, Minke Whale)

Protein Percentage 96.43%
cDNA percentage 97.09%
Ka/Ks Ratio 0.69657 (Ka = 0.0268, Ks = 0.0385)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5817 bp    Location:1121770..1049171   Strand:-
>bmy_04117
ATGGGAGATGACAGTGAGTGGGTGAAACTGCCGGTTGATCAGAAATGTGAACACAAGCTGTGGAAAGCAAGGTTAAGTGGGTATGAAGAGGCCCTGAAGATCTTCCAGAAAATAAAGGATGAAAAGAGCCCAGAATGGTCCAAATTTTTAGGATTGATCAAAAAATTTGTGACTGATTCCAATGCAGTGGTTCAGTTGAAAGGATTAGAAGCTGCGCTTGTTTATGTTGAAAATGCCCATGTAGCAGGAAAAACCACGGGGGAAGTTGTATCAGGTGTTGTGAGTAAAGTGTTCAACCAACCCAAGGCCAAAGCCAAGGAGCTAGGCATTGAGATTTGTCTAATGTACATAGAGATTGAGAAAGGAGAGGCTGTGCAAGAAGAGCTCCTGAAAGGCCTGGACAATAAGAACCCCAAGATCATAGTGGCCTGTATAGAGACACTGAGGAAAGCCTTAAGTGAATTTGGTTCCAAAATCATCTTACTGAAGCCAATTATCAAAGTGTTGCCAAAACTCTTTGAGTCTCGAGAGAAGGCTGTTCGAGATGAAGCTAAACTAATTGCTGTGGAGATTTATAGATGGATTCGAGATGCTCTGAGACCCCCATTACAAAGTATAAACTCTGTCCAGTTGAAAGAACTAGAAGAAGAATGGGTCAAACTGCCAACAGGTGCTCCTAARCCAAGTAGGTTTTTGCGTTCCCAGCAAGAACTAGAAGCTAAATTGGAACAGCAACAGTCTGCTGGTGGAGATACTGAGGGAGGAGGCAAAAAAATGGCAAGAAAGAAAAGAAGCCCTGGAAGCTGTGGAAGTACTAGTGAAAAACCCGAAACTGGAAGCAGGCGATTATGCAGATTTAGTAAAAGCTTTGAAGAAGGTTGTTGGAAAGGACACCAATGTCATGTTGGTGGCTCTGGCAGCAAAATGTCTTACTGGCCTGGCTGTTGGGCTAAGGAAGAAATTTGGACAACCACACTACAGAACATCAGTGAGGATGTTTTAGCAGTAATGGATAATAAAAATCCAACCATCAARCAGCAGACATCTCTTTTTATTGCAAGAAGCTTCCGCCACTGCACTGCTTCTACCCTGCCAAAGAGCTTACTAAAGCCCTTTTGTGCTGCTCTACTTAAGCACATCAATGATTCTGCTCCTGACGTCAGAGATGCTGCATTTGAAGCACTGGGTACTGCTTTGAAGGTGGTTGGTGAGAAAGCAGTAAACCCATTCTTAGCTGATGTCGACAAACTCAAGCTTGATAAGATCAAAGAATGTTCAGAAAAAGTAGAGCTCGTACATGGTAAGAAAGCTGGACTTGCAGCTGACAAGAAGGAGTTCAAGCCTGTGCCGGGAAGAGCTGCTGCTTCGGGGGCTACAGGAGATAAGGACACAAAGGACATTTCAGCACCCAAACCAGGACCCTTAAAAAAGGCACCTGCTACTAAGCCTGGCGGGCCACCGAAGAAGGGGAAACCAGCTGCACTAGGAGGCACAGGGAGCACTGGAACCAAGAGCAAGAAAGGGTTGGAGACTAAAGAAATAGTGGAGCCTGAGCTCTCGATAGAAGTATGTGAAGAAAAAGCTTCAGCTGTCCTTCCTGCTACCTGTATACAGCTTCTAGACAGCAGTAACTGGAAGGAAAGGCTGGCCTGTATGGAAGAGTTCCAAAAGGCATTAGTGAGGATGCTGGCCAAGAAACCTGGATGGAAAGAAACTAATTTTCAGAAGGGAAATTTTTCCAAAACTTCAGCTCAGATCGTCTTAGATGGCCTTGTAGACAAGATTGGAGATGTGAAATGTGGGAACAATGCAAAAGAAGCTATGACAGCAATAGCTGAAGCTTGTATGTTGCCATGGACAGCTGAACAGGTTATGTCAATGGCTTTCTCACAGAAGAATCCCAAGAATCAGTCAGAAACTCTGAATTGGCTRTCAAATGCAATAAAAGAATTTGGTTTTTCTGGATTGAACGTGAAAGCTTTCATTAGCAATGTGAAGACAGCTCTTGCTGCAACAAACCCAGCTGTGAGGACTTCTGCCATCACCTTGCTTGGTGTGATGTATCTGTACGTTGGTCCTTCTTTGCGAATGTTCTTTGAGGATGAGAAGCCTGCCCTCCTATCCCAGATAGATGCAGAATTTGAGAAGATGCAGGGACAGAACCCACCTGCTCCAACCAGAGGGATTTCCAAACACAGTACAAGTGGTACAGATGAAGGAGAAGATGGAGACGAACCAGATGATGGGGGCAATGATGTTGTGGATCTTTTGCCAAGGACAGAAATCAGTGATAAAATCACTTCAGAGTTGGCGTCTAAGATTGGTGACAAGAATTGGAAGATCAGGAAAGAAGGCCTAGATGAAGTGGCAGGTATTATCAATGAAGCAAAATTTATCCAGCCAAACATAGGTGAACTTCCAACTGCCTTGAAGGGTCGACTCAACGATTCAAATAAAATCTTGGTGCAGCAGACGTTGAATATCCTCCAGCAGTTGGCAGTAGCCATGGGCCCAAACATCAAGCAACATGTGAAGAACTTAGGCATCCCTATCATCACAGTGCTTGGAGACAGCAAGAACAATGTTCGAGCTGCTGCCCTAGCAACTGTGAATGCTTGGGCAGAACAGACTGGCATGAAGGAATGGCTGGAGGGGGAAGATCTTTCTGAAGAGCTCAAAAAGGAAAATCCTTTCTTGAGGCAAGAGCTTCTGGGCTGGCTGGCTGAGAAACTACCGACTCTCCGTTCCACCCCCACAGACCTTATCCTTTGTGTTCCCCACCTCTACTCCTGCCTAGAGGATCGCAATGGAGATGTGCGAAAGAAGGCCCAAGATGCCTTGCCATTCTTCATGATGCATTTAGGATATGAGAAAATGGCCAAGGCTACTGGGAAACTAAAACCAACTTCTAAAGATCAGGTGTTGGCCATGTTAGAGAAAGCCAAAGCTAACATGCCAGCCAAGCCCGCTGCACCTGCTAAAGCAACTTCCAAACCCGTGGGAGGATCAGCTCCAGCCAAATTCCAGCCTGCCTCAGCACCTGTTGAAGATTCTGTTTCTGGCACTGTAGAACCCAAGCCTGATCCAAAAAAGGCCAAAGCTCTAGGAGTTTCCTCTAAAGCAAAGACTGCACAAGGAAAGAAAGTGCCAAGCAAAACCAGCTTAAAGGAAGATGAAGACAAATCTGGTCCTATTTTTATTGTTGTTCCAAATGGAAAGGAGCAAAGAATGAAAGATGAGAAAGGGTTAAAGGTGCTGAAGTGGAATTTTACTACTCCGCGGGATGAATACATTGAGCAACTAAAAACTCAAATGTCTAGCTGTGTGGCTAAATGGTTACAAGATGAGATGTTTCACTCAGACTTTCAGCATCACAACAAAGCCCTTGCTGTCATGGTTGATCACTTGGAGAGTGAAAAAGAGGGTGTCATTGGTTGCCTGGATCTTATCTTAAAGTGGCTTACCCTGCGGTTTTTTGACACCAATACAAGCGTCCTAATGAAAGCCCTAGAATATTTAAAATTGCTCTTCACCCTGCTGAGTGAGGAGGAGTATCATCTTACTGAGAATGAAGCATCTTCCTTCATCCCCTATCTCATCCTCAAGGTCGGAGAACCAAAGGATGTCATTCGTAAAGATGTCCGTGCCATCCTGAACCGGATGTGCCTTGTCTACCCAGCCAGCAAGATGTTCCCCTTCATCATGGAAGGAACCAAATCCAAAAACTCTAAGCAGAGAGCAGAGTGCCTAGAAGAACTAGGGTGTCTGGTCGAGTCCTATGGCATGAATGTTTGCCAACCAACCCCAGGAAAAGCCTTAAAGGAGATAGCGATTCACATAGGAGACCGCGACAACGCTGTGCGCAATGCTGCCCTCAACACCATCGTCACAGTGTACAATGTACACGGGGATCAGGTGTTCAAACTGATTGGAACTCTTTCTGAAAAGGATATGAGCATGCTTGAGGAGAGGATTAAGCGGTCAGCAAAGAGGCCTTCTGCTGCACCAGTAAAACAGGTGGAAGAGAAACCTCAGCGTACACAGAGCATAAGCTCCAATACCAACATGCTACGCAAGGGACCAGCTGAGGACATGTCTTCCAGACTCAACCAAGCCCGAAGCATGAGTGGGCATCCTGAGGCAGCCCAGATGGTTCGCCGAGAATTCCAGCTGGATCTAGATGAGATTGAGAATGACAATGGTACAGTCCGATGTGAAATGCCAGAACTTGTTCAGCACAAACTAGATGACATTTTTGAACCAGTCCTTATTCCTGAACCCAAGATCCGGGCTGTTTCTCCACACTTTGATGATATGCACAGTAATACAGCATCCACAATCAATTTCATTATCTCCCAAGTAGCCAGTGGTGACATCAACACAAGCATCCAAGCTCTGACACAGATCGATGAGGTCCTGAGACAGGAAGACAAAGCAGAAGCCATGTCTGGCCATATTGATCAGTTTCTGATAGCCACATTCATGCAGCTGAGACTCATCTACAACACACATATGGCAGATGAGAAATTGGAGAAGGATGAAATCATCAAGTTGTATAGCTGTATCATCGGCAACATGATTTCGCTGTTTCACATAGAAAGCCTCGCCCGAGAGGCCTCCACTGGAGTTTTGAAAGACCTGATGCATGGCCTCATCACCTTAATGCTGGATTCTCGAATTGAAGATCTGGAGGAAGGGCAACAGGTGATCCGCTCTGTGAACCTCTTGGTGGTGAAAGTTCTGGAGAAGTCAGACCAGACCAACATCCTGAGCGCCCTACTTGTTTTGCTCCAAGACAGCCTGCTAGCAACAGCCAGTTCTCCCAAATTCTCAGAGCTTGTTATGAAGTGTCTCTGGAGAATGGTTCGACTACTGCCTGATACCATCAACAGCATTAATCTGGACAGAATTCTTCTGGATATACACATTTTCATGAAGGTCTTCCCCAAAGAGAAACTAAAGCAATGCAAAAGTGAATTTCCCATAAGGACCCTAAAAACGCTGCTGCACACTTTATGCAAATTAAAAGGGCCCAAGATCCTAGACCACCTAACAATGATTGACAACAAGAATGAGTCAGAGTTGGAGGCCCACCTCTGCCGGATGATGAAGCACAGTATGGACCAGACCGGGAGCAAGTCTGATAAGGAAACAGAAAAGGGAGCATCTCGAATTGATGAAAAATCATCAAAGGCCAAAGTGAATGATTTCTTAGCTGAGATTTTTAAGAAGATTGGTTCTAAAGAGAACACTAAAGAGGGCCTAGCAGAGTTATATGAATATAAGAAGAAATATTCAGATGCTGACATTGAACCATTTCTGAAAAATTCCTCACAGTTCTTCCAGAGCTATGTTGAGAGAGGCCTTCGGGTGATTGAGATGGAGAGGGAGGGCAAAGGCCGTATTCCCATTTCAACAGGCATCTCCCCCCAGATGGAAGTCACATGTGTGCCCACTCCCACAAGCACAGTGTCCTCCATAGGTAACACAAATGGAGAAGAGGTGGGACCATCTGTCTATCTGGAGAGGCTAAAAATCCTGCGACAGCGATGTGGTCTGGACAATACAAAGCAAGATGACCGACCTCCGTTGACCTCTTTGCTTTCCAAACCAGCAGTTCCTACCGTTGCCTCTTCCACAGACATGCTGCACAGCAAACTCTCTCAGCTCCGGGAGTCACGGGAGCAGCACCAGCATTCAGACCTGGATTCCAACCAGACTCACTCTTCAGGAACCATGACTACATCCTCCTCCTCCACAGCTAACATTGATGACTTGAAAAAAAGACTGGAGAGAATAAAGAGCAGTCGCAAGTGA

Related Sequences

bmy_04117T0 Protein

Length: 1939 aa      View alignments
>bmy_04117T0
MGDDSEWVKLPVDQKCEHKLWKARLSGYEEALKIFQKIKDEKSPEWSKFLGLIKKFVTDSNAVVQLKGLEAALVYVENAHVAGKTTGEVVSGVVSKVFNQPKAKAKELGIEICLMYIEIEKGEAVQEELLKGLDNKNPKIIVACIETLRKALSEFGSKIILLKPIIKVLPKLFESREKAVRDEAKLIAVEIYRWIRDALRPPLQSINSVQLKELEEEWVKLPTGAPKPSRFLRSQQELEAKLEQQQSAGGDTEGGGKKMARKKRSPGSCGSTSEKPETGSRRLCRFSKSFEEGCWKGHQCHVGGSGSKMSYWPGCWAKEEIWTTTLQNISEDVLAVMDNKNPTIKQQTSLFIARSFRHCTASTLPKSLLKPFCAALLKHINDSAPDVRDAAFEALGTALKVVGEKAVNPFLADVDKLKLDKIKECSEKVELVHGKKAGLAADKKEFKPVPGRAAASGATGDKDTKDISAPKPGPLKKAPATKPGGPPKKGKPAALGGTGSTGTKSKKGLETKEIVEPELSIEVCEEKASAVLPATCIQLLDSSNWKERLACMEEFQKALVRMLAKKPGWKETNFQKGNFSKTSAQIVLDGLVDKIGDVKCGNNAKEAMTAIAEACMLPWTAEQVMSMAFSQKNPKNQSETLNWLSNAIKEFGFSGLNVKAFISNVKTALAATNPAVRTSAITLLGVMYLYVGPSLRMFFEDEKPALLSQIDAEFEKMQGQNPPAPTRGISKHSTSGTDEGEDGDEPDDGGNDVVDLLPRTEISDKITSELASKIGDKNWKIRKEGLDEVAGIINEAKFIQPNIGELPTALKGRLNDSNKILVQQTLNILQQLAVAMGPNIKQHVKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTGMKEWLEGEDLSEELKKENPFLRQELLGWLAEKLPTLRSTPTDLILCVPHLYSCLEDRNGDVRKKAQDALPFFMMHLGYEKMAKATGKLKPTSKDQVLAMLEKAKANMPAKPAAPAKATSKPVGGSAPAKFQPASAPVEDSVSGTVEPKPDPKKAKALGVSSKAKTAQGKKVPSKTSLKEDEDKSGPIFIVVPNGKEQRMKDEKGLKVLKWNFTTPRDEYIEQLKTQMSSCVAKWLQDEMFHSDFQHHNKALAVMVDHLESEKEGVIGCLDLILKWLTLRFFDTNTSVLMKALEYLKLLFTLLSEEEYHLTENEASSFIPYLILKVGEPKDVIRKDVRAILNRMCLVYPASKMFPFIMEGTKSKNSKQRAECLEELGCLVESYGMNVCQPTPGKALKEIAIHIGDRDNAVRNAALNTIVTVYNVHGDQVFKLIGTLSEKDMSMLEERIKRSAKRPSAAPVKQVEEKPQRTQSISSNTNMLRKGPAEDMSSRLNQARSMSGHPEAAQMVRREFQLDLDEIENDNGTVRCEMPELVQHKLDDIFEPVLIPEPKIRAVSPHFDDMHSNTASTINFIISQVASGDINTSIQALTQIDEVLRQEDKAEAMSGHIDQFLIATFMQLRLIYNTHMADEKLEKDEIIKLYSCIIGNMISLFHIESLAREASTGVLKDLMHGLITLMLDSRIEDLEEGQQVIRSVNLLVVKVLEKSDQTNILSALLVLLQDSLLATASSPKFSELVMKCLWRMVRLLPDTINSINLDRILLDIHIFMKVFPKEKLKQCKSEFPIRTLKTLLHTLCKLKGPKILDHLTMIDNKNESELEAHLCRMMKHSMDQTGSKSDKETEKGASRIDEKSSKAKVNDFLAEIFKKIGSKENTKEGLAELYEYKKKYSDADIEPFLKNSSQFFQSYVERGLRVIEMEREGKGRIPISTGISPQMEVTCVPTPTSTVSSIGNTNGEEVGPSVYLERLKILRQRCGLDNTKQDDRPPLTSLLSKPAVPTVASSTDMLHSKLSQLRESREQHQHSDLDSNQTHSSGTMTTSSSSTANIDDLKKRLERIKSSRK*