Sequence detailsbmy_03921 (Coding sequence)

Part of scaffold_118 (SequenceType object (1))

For more information consult the page for scaffold_118 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAN2ENSTTRG00000007150 (Bottlenosed dolphin)

Gene Details

PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006766, Bottlenosed dolphin)

Protein Percentage 82.08%
cDNA percentage 81.9%
Ka/Ks Ratio 0.16009 (Ka = 0.0041, Ks = 0.0253)

PAN2ENSBTAG00000004376 (Cow)

Gene Details

PAB-dependent poly(A)-specific ribonuclease subunit 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053637, Cow)

Protein Percentage 99.03%
cDNA percentage 96.76%
Ka/Ks Ratio 0.03818 (Ka = 0.0045, Ks = 0.1191)

PAN2 (Minke Whale)

Gene Details

PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU008135, Minke Whale)

Protein Percentage 99.91%
cDNA percentage 99.66%
Ka/Ks Ratio 0.03362 (Ka = 0.0004, Ks = 0.0126)

Genome Location

Sequence SequenceType object (2)

Length: 3393 bp    Location:1441322..1454787   Strand:+
Raw sequence 
>bmy_03921
ATGAACTTCGAGGTTCTGGACCCTGGACTGGCAGAGTATGCCCCAGCCATGCATTCTGCCCTGGATCCTGTCCTGGATGCCCACCTGAACCCAAGTCTGCTACAGAATGTGGAGCTGGACCCGGAGGGAGTGGCCTTAGAGGCTCTTCCCGTCCAGGAGTCAGTGCACATAATGGAAGGTGTCTACTCTGAGTTGCACAGTGTGGTGGCTGAAGTGGGTGTGCCTGTCTCCGTCTCCCACTTTGACTTGCACGAGGAGATGCTGTGGGTGGGAAGCCATGGGGGCCATGCCACGTCATTTTTCGGGCCAGCTTTGGAACGCTACTCATCATTTCAGGTCAATGGCAGTGATGACATTCGGCAGATCCAAAGCCTGGAGAATGGCATCCTTTTTCTTACCAAGAACAACCTGAAGTATATGGCCCGTGGAGGCCTCATTATATTTGATTACCTGCTGGATGAGAGTGAAGATATGCACAGTCTGCTGCTGACTGACAGCAGCACTCTGCTTGTTGGTGGGCTGCAGAACCACATATTGGAGATTGACCTTAACACTGTCCAGGAGACTCAGAAGTATGCAGTTGAGACACCTGGAGTCACTATCATGAGACAGACGAATCGCTTCTTCTTCTGTGGCCACACATCTGGCAAGGTTTCCCTGCGAGACCTCCGTACTTTTAAGGTGGAGCATGAGTTTGATGCCTTCTCAGGGAGTCTGTCGGATTTTGATGTGCACGGCAACCTGCTAGCCACTTGTGGTTTCTCCAGCCGCCTCACTGGCCTGGCCTGTGACCGTTTCCTCAAGTGCCAGTTTTGTGAGCCCACAGGCCTGGCCAACCCAGCAGACATCTTTCACGTGAATCCTGTGGGGCCTCTGCTAATGACGTTTGACGTGTCAGCCAGCAAGCAGGCCCTCGCCTTTGGGGATTCTGAGGGCTGTGTGCATCTCTGGACTGATTCCCCTGAGCCTTCCTTCAACCCCTACTCCCGTGAGACCGAGTTTGCTTTGCCCTGTCTCGTGGACTCACTGCCTCCTCTGGACTGGAGCCAGGACCTGCTGCCTCTTTCCCTCATCCCTGTCCCGCTCACCACTGACACGCTTCTCTCTGATTGGCCTGCTGCCAACTCCGCTCCAGCTCCCAGGCGAGCACCCCCTGTGGATGCAGAGATTCTGCGCACCATGAAGAAGGTGGGCTTCATTGGCTATGCACCCAACCCCCGCACCAGGCTGCGCAATCAGGTCACTGAGTCACCAATAGGGCGGGAAGAGGAGCCACATCGCCACATGGTCTCTAAGAAATACCGCAAGGTGACCATCAAATACTCCAAGTTAGGGCTGGAGGACTTTGACTTCAAACACTACAATAAGACGCTGTTTGCTGGATTAGAGCCCCACATCCCCAATGCCTACTGTAACTGCATGATCCAGGTGCTCTATTTCCTGGAGCCTGTTCGCTGTCTAATCCAGAACCACCTTTGCCAGAAGGAGTTCTGCCTAGCATGTGAGCTGGGCTTCCTCTTCCACATGCTGGACCTCTCCCGAGGTGACCCTTGTCAGGGCAGTAATTTTCTTCGGGCGTTCCGCACCATTCCTGAGGCCTCAGCCCTTGGTCTGATTTTGGCTGACTCGGATGAGGCTTCAGGCAAGGGCAATCTGGCCAGGCTCATTCAGAGGTGGAATCGCTTCATTCTCACTCAACTGCATCAAGATTTGCAGGAGCTGGAAGTACCCCAGGCTTATCGAGGTGCTGGAGGCAGCAGCTTTTGCTCATCGGGAGACTCTGTCATTGGGCAGCTGTTCAGCTGTGAGATGGAAAACTGCAGCCTCTGCCGCTGTGGCAGTGAGACCGTGCGAGCCTCATCCACCCTGCTCTTCACGCTCTCCTACCCTGAGGATAAAACCGGGAAGAACTGTGACTTTGCTCAGGTGCTGAAGCGAAGCATCTGCCTGGAGCAGAATACACAGGCCTGGTGTGACAACTGTGAAAAGTACCAGCCCACGATTCAGACCCGCAACATCTGCCATCTCCCAGATATTCTTGTCATCAATTGTGAGGTGAACAGCTTGAAAGAAGCTGATTTCTGGAGAATGCAGGCTGAGGTTGCCTTCAAGATAGCAATAAAGAAGCATGGTGGGGAAATCTCCAAGAATAAGGAGTTTGCTTTGGCTGATTGGAAGGAACTAGGGAGTCCAGAGGGCATGCTGATGTGTCCCTCCATTGAGGAGTTGAAGAATGTCTGGCTTCCTTTCTCCATTCGAATGAAGATGACCAAGAACAAAGGGCTGGATTGGGGCCCAGCCAGGGCAGACGAGGAGCATGGTGTCTATGTGTATGACCTGATGGCTACTGTGGTACACATCCTGGACTCACGCACAGGGGGCAGCCTGGTGGCTCACATCAAAGTTGGAGAGACCTACCACCAGCGCAAGGAGGGTGTTACCCACCAGCAGTGGTATCTCTTCAATGACTTTCTCATTGAACCTATTGATAAGCATGAAGCTGTGCAGTTTGACATGAATTGGAAAGTGCCTGCTATCCTTTATTACATCAAAAGGAATCTTAATTCCAAATACAACCTGAACATTAAGAACCCTATCGAGGCAAGTGTTCTGCTGGCTGAAGCCTCATTAGCACGGAAGCAGCGGAAAACACATACGACCTTTATTCCCCTGATGCTGAATGAGATGCCACAGGTTGGGGACTTGGTGGGCCTGGACGCTGAGTTTGTCACCCTTAATGAGGAAGAAGCAGAGCTGCGCAGCGATGGCACCAAGTCTACCATCAAGCCAAGCCAGATGTCAGTAGCGAGGATTACCTGCGTTAGGGGCCAGGGACCCAATGAGGGTATCCCCTTCATTGATGACTACATCTCTACCCAGGAGCAGGTGGTGGATTACTTGACTCAGTACTCAGGGATAAAGCCAGGAGACCTTGATGCCAAGATTTCCTCTAAGCACCTCACAACTCTAAAGTCTACCTACTTAAAGCTTCGTTTTCTCATAGACATTGGAGTCAAGTTTGTGGGTCACGGTCTGCAGAAGGACTTCCGGGTCATCAACCTCATGGTGCCCAAGGACCAAGTCCTTGACACTGTTTATCTATTTCACATGCCCCGAAAACGAATGATTTCCCTGCGATTCCTTGCTTGGTACTTTCTGGACCTGAAGATTCAAGGGGAGACCCATGACAGTATTGAGGATGCCCGCACAGCCCTTCAGCTTTACCGAAAGTATCTGGAGCTAAGCAAAAATGGCACTGAGCCTGAGTCCTTCCACAAAGTGCTCAAGGGCCTTTACGAGAAAGGCCGAAAGATGGACTGGAAGGTGCCTGAGCCCGAGGGCCAGACAAGTCCCAAGAATGCAGCTGTCTTCTCTTCAGTGCTGGCGCTCTGA

Related Sequences

bmy_03921T0 SequenceType object (3)

Length: 1131 aa      View alignments
>bmy_03921T0
MNFEVLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEGVYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDESEDMHSLLLTDSSTLLVGGLQNHILEIDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLSDFDVHGNLLATCGFSSRLTGLACDRFLKCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQVTESPIGREEEPHRHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEASGKGNLARLIQRWNRFILTQLHQDLQELEVPQAYRGAGGSSFCSSGDSVIGQLFSCEMENCSLCRCGSETVRASSTLLFTLSYPEDKTGKNCDFAQVLKRSICLEQNTQAWCDNCEKYQPTIQTRNICHLPDILVINCEVNSLKEADFWRMQAEVAFKIAIKKHGGEISKNKEFALADWKELGSPEGMLMCPSIEELKNVWLPFSIRMKMTKNKGLDWGPARADEEHGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKHEAVQFDMNWKVPAILYYIKRNLNSKYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAAVFSSVLAL*