Sequence details bmy_03900 (Coding sequence)

Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000015759 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014928, Bottlenosed dolphin)

Protein Percentage 94.62%
cDNA percentage 95.99%
Ka/Ks Ratio 0.24656 (Ka = 0.0266, Ks = 0.108)

RDH16 ENSBTAG00000001392 (Cow)

Gene Details

retinol dehydrogenase 16

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001829, Cow)

Protein Percentage 84.23%
cDNA percentage 87.59%
Ka/Ks Ratio 0.2048 (Ka = 0.0848, Ks = 0.4142)

Additional orthologs identified in other species via the OPTIC pipeline.

RDH16 (Human)  

Genome Location

Sequence Coding sequence

Length: 1587 bp    Location:966103..987325   Strand:+
Raw sequence 
>bmy_03900
ATGGTGCAGGGGGCCCAGCAGCTGAAGGGCCAGACATCAGACAGGCTGGAGACAGTGATCCTGGACGTCACCAATACTGAGAGCATTGCTGTGGCCACCAAGTGGGTGAAGGAGCGTGTGGGGGACAGAGGACTCTGGGGCCTGGTGAATAAAGCCGACATCTCCATGCCCACCGCACCCAATGAGTGGCTGACCAAACAGAACTTCATGAAGATACTGGACGTAAACCTGTTGGGGGTGATCGAGGTGACCCTGAGTCTGCTGCCCCTAGTGCGGAAGGCGAGGGGCCGTGTAGTCAATATCTCCAGTGTTGGGCAGGGTGTCTCTCTTTGGTGGGAGCTTCTCCATGTCCAAGAGAGAGCTCTCTACTTTGGGGTGAAAATAACTATGATCAAGCCTGGTCAAGACGGCTATGTCCACCAAGATGATCTGAGAATATCTCCTCATGAGGGACTGCATGGATCATGCCCTGACGCCTGCCACCCCCAGATCCAATACTCACCTGGCTCCATGTGGCTGTACCTGGTGGTCCTCGTGGGCCTGTACTACCTCCTGCGTTGGTACCGGGAGAAGCAGGTGGTGAGCCACCTCCAGGACAAGTTCGTCTTCATCACGGGCTGTGACTCAGGCTTCGGGAACCTGCTGGCCAGGCAGCTGCACCTGCGAGGCTTGAGGGTGCTGGCTACGTGTCTGACGGAGCAGGGGGCCGAGCAGCTGAGGAACCAGACGTCAGACAGGCTGGAGACAGTGATCCTGGACGTCACCAAGACTGAGAGCATCGCTGTGGCCACTGAGTGGGTGAAGGAGCGTGTCGGGGACAGAGGACTCTGGGGCCTGGTGAATAATGCCGGCATTTGTACGCCCATGGCACCCAATGAGTGGCTGACCAAACAAGACTTCGTAAAGATGCTCGACGTGAACCTGTTGGGGATGATTGAGGTGACCCTGAGTCTGCTGCCCCTAGTGCGGAAGGCGAGGGGCCGTGTGGTCAACGTCTCCAGTGTCATGGGCCGCGTGTCCCTCTTTGGTGGAGGTTACTGCATGTCCAAGTACGGCGTGGAGGCTTTCTCAGACTCCCTCAGGAGGGAGCTCTCCTACTTCGGAGTGAAGGTGGTGATGATTGAGCCCGGTTACTTCATGACCAATATGACCAGCCCTGAGGTGTTTAATGGAAGCCTCCAGGCATCATGGGATCAGGCCAGCCCAGAGATCAAGGAACTCTATGGAGAGAAGTTCGTGGCTAACTTCATGAAGACGTCTAATTTATTGAAGCCATCATGGTCCGGGAATCTGTCCTTGGTGACCGACTGCATGGAGCATGCCCTGACCGCCTGCCACCCCCGCACCCGATACTCCCCTGGCTGGGACGCCAAGCTCTTCTACCTCCCCATGAGCTACATGCCCACCTTCCTGGTGGATCTCATGATGTACTGGGGTGCCCCACGGCCTGCTAAGGCCCTGAAGGAGCTCTCCTACTTTGGGGTGAAGGTGGCGATGATTGAGCCTGGTAACTTCAAGGCCTTTGTGACCAGCCCTGAGGCAATTTCTCGGGGTCTCCAGGCAGCATGGGATCAGGCCAACCCATAG

Related Sequences

bmy_03900T0 Protein

Length: 529 aa      View alignments
>bmy_03900T0
MVQGAQQLKGQTSDRLETVILDVTNTESIAVATKWVKERVGDRGLWGLVNKADISMPTAPNEWLTKQNFMKILDVNLLGVIEVTLSLLPLVRKARGRVVNISSVGQGVSLWWELLHVQERALYFGVKITMIKPGQDGYVHQDDLRISPHEGLHGSCPDACHPQIQYSPGSMWLYLVVLVGLYYLLRWYREKQVVSHLQDKFVFITGCDSGFGNLLARQLHLRGLRVLATCLTEQGAEQLRNQTSDRLETVILDVTKTESIAVATEWVKERVGDRGLWGLVNNAGICTPMAPNEWLTKQDFVKMLDVNLLGMIEVTLSLLPLVRKARGRVVNVSSVMGRVSLFGGGYCMSKYGVEAFSDSLRRELSYFGVKVVMIEPGYFMTNMTSPEVFNGSLQASWDQASPEIKELYGEKFVANFMKTSNLLKPSWSGNLSLVTDCMEHALTACHPRTRYSPGWDAKLFYLPMSYMPTFLVDLMMYWGAPRPAKALKELSYFGVKVAMIEPGNFKAFVTSPEAISRGLQAAWDQANP*