Sequence details bmy_03880 (Coding sequence)

Part of scaffold_118 (Scaffold)

For more information consult the page for scaffold_118 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MBD6 ENSTTRG00000013090 (Bottlenosed dolphin)

Gene Details

methyl-CpG binding domain protein 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012420, Bottlenosed dolphin)

Protein Percentage 82.49%
cDNA percentage 82.16%
Ka/Ks Ratio 0.16624 (Ka = 0.0046, Ks = 0.0274)

MBD6 ENSBTAG00000010616 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014034, Cow)

Protein Percentage 97.22%
cDNA percentage 96.39%
Ka/Ks Ratio 0.19236 (Ka = 0.015, Ks = 0.0782)

Additional orthologs identified in other species via the OPTIC pipeline.

MBD6 (Human)   Mbd6 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3258 bp    Location:504080..497982   Strand:-
Raw sequence 
>bmy_03880
ATGAATGGGGGCAATGAGAGCAGTGGAGCAGACAGAGCTGGGGGCCCTGTGGCCACATCTGTCCCCATCGGCTGGCAGCGCTGTGTTCGAGAGGGTGCTGTGCTCTATATCAGCCCAAGTGGCACAGAGCTGTCTTCCTTGGAGCAAACCCGGAGCTACCTCCTCAGCGATGGGACCTGCAAGTGCGGTCTGGAGTGTCCACTCAATGTCCCCAAGGTTTTCAACTTTGACCCTTTGGCCCCGGTGACCCCGGGTGGGGCTGGGGTGGGGCCAGCATCAGAGGAGGACATGACCAAGCTGTGCAACCACCGGCGGAAAGCCGTTGCCATGGCAACTCTGTACCGCAGCATGGAGACCACCTGCTCACACTCTTCTCCTGGTGAATCTTTTCACTTTACTTTAGAGACTGAGGAAAACTTAAGGGCCTGGAAGAGGGATGGTGGGAGGAGCTTTGTGAGAGGGAAGCAAGGAGAAGGGTGGAGTGGGGAGTTGCTTGGTGAGAGGAGGACACAGGGAAGCTGGGAATTTATGGGAGAAGGGATGGAGAAGACAAAAGAAAGTTCTTGGAAGGGGAGCCACAGGTTGATCCTTTGTTTCTTATTTATTGCAGGAGAGGGAGCGAGCCCCCAAATGTTCCACACTGTGTCCCCAGGGCCTCCCTCTGCCCGCCCTCCCTGTCGAGTTCCTCCTACAACTCCGCTTAATGGGGCTCCTGGCTCCCTTCCCCCAGAACCACCTTCAGTTCCACAGGCTTTCCCCCCTCTAGCAGGCCCTGGGGGGCTCTTCCCACAGCCAAGGCTTCCTGACCCAGTCCCCTCCGGAGGCAGCAGCAGCCCTTGTTTCCTGCCAAGGGGCAATGCCCCCTCTCCAGCTCCACCTCCTCCACCTGCTATCAGCCTCAATGCCCCCTCATATAGCTGGGGAGCTGCTCTCCGATCCAGCCTGGTGCCCCCTGACTTGGGCTCTTCTCCAGCCCCCCATGCCTCCTCCTCACCACCTTCTGACCCTCCTCTCTTCCACTGTAGTGATGCCTTAACACCCCCTCCCCTGCCCCCAAGCAATAATCTCCCTGGTCCCCCTGGCCCCCCTGGTCCTGCCACTCAGCCACCAGTGTCTTCAGCCACTATGCACCTGCCCCTGGTCCTGGGGCCCCTAGGAGGGGCCCCCACGGTGGAGGGGCCCAGGGCGCCCCCCTTCCTTGCTAGCAGCCTACTCTCTGCAGCGGCCAAGGCACAGCACCCCCCCCTCCCCCCTCCCAGCACTTTACAGGGCCGAAGGCCCCGTGCCCAGGCACCCTCAGCTTCCCACTCCTCATCATCGCCCCGTCCCTCTCAGCGTCGTCCCCGCCGCCCCCCAACTGTACTGCGATTGCTAGAAGGGGGAGGCCCTCAAGCCCCTAGACGGAGCCGCCCTCGGGCCCCCGCTCCCGCCCCACAACCTTTTCCTCTCCCTGAGCCCTCCCAACCGATTCTCCCTTCTGTGCTGTCCCTGCTGGGACTCCCCACCCCTGGCCCTCCCAACTCTGATGGAAGCTTTAACCTTTTGGGGTCAGACGCACACCTTCCTCCTCCCCCAACCCTCTCCTCAGGGAGCCCTCCCCAGCCCAGGCACCCCATCCCGCCCTCCCTGCCTGGGACCACCAGTGGCAGCCTCAGCAGTGTGCCAGGTGCCCCTGCCCCACCAGCTGCCTCCAAAGCCCCCCTAGTCCCTAGCCCTGTGCTTCAAAGCCCATCCGAAGCGCTCGGGATGGGGTCGGGCCCAGCCTGCCCTCTGCCTCCCCTGGCTGGTGGGGAGGCTTTCCCGTTCCCCAGCCCCGAGCAGGGCCTGGCGCTGAGTGGAGCCGGTTTCCCGGGGATGCTAGGGACCTTGCCTCTCCCTCTGAGTCTGGGGCAACCTCCGCCTTCTCCATTGCTCAGCCACAGTTTATTTGGCGTGCTGGCTGGGGGAGGGGGACAACCTCCCCCTGAGCCCCTGCTACCCCCACCAGGGGGACCTGGCCCTCCCCTAGCCCCAGGCGAGCCCGAAGGGCCTTCGCTTTTGGTGGCTTCCCTGCTTCCACCACCCGCCTCAGACCTTCTTCCACCCCCTTCCGCACCCCCTAGCAACCTTCTTGCCTCCTTCCTGCCCCTGTTGGCCCTGGGCCCCACAGCTGGGGATGGAGAGGGATCTGCAGAGGGAGCTGGGGGTCCAAGTGGGGAGACATTTTCAGGTTTGGGAGACCTGCCCCCCTTGCTGTTCCCCCCACTTTCAGCCCCCCCCACCCTCATAGCTTTAAATTCTGCGCTGCTGGCTGCCAGCCTGGATCCCCCGTCGGGGGCGCCCCCCCAGCCCTGTGTCCTGAGTGCCCCCCAACCTGGACCACCTACCTCCAGTGTCACCACGGCAACTACTGACCCGGGGGCCTCCTCTCTGGGCAAGGCCCCCTCCAACTCAGGGAGACCCCCCCAACTCCTTAGCCCTCTGCTGAGTGCCAGCCTGCTGGGTGACCTGTCTTCACTGACCAGCAGCCCTGGAACCCTCCCCAGTCTGCTGCAGCCTCCTGGCCCTCTTCTCTCTGGCCAGTTGGGGCTGCAGCTCCTCCCTGTGGGGGGAGCTCCTCCACCCCTCTCAGAGGCTTCTAGCCCCCTAGCCTGCCTGCTACAGAGTCTCCAGATCCCTCCAGAGCAGCCAGAAGCCCCCTGTCTGCCCCCTGAGAGCCCCACCTCAGCCCTTGAACCGGAGCCTGCCCGGCCTCCCCTCAGTGCCTTAGCCCCACCCCACAGTTCTCCTGACCCCCCAGTCCCTGAGCTGCTCACTGGGAGGGGGTCAGGGAAACGGGGCCGGAGGGGAGGAGGGGGACTTAGGGGCATTAATGGTGAGGCCAGGCCAGGCCGGGGCCGAAAGCCTGGCAGCCGGCGGGAGCCTGGCCGACTGGCCCTCAAGTGGGGGGCACGTGGTGGCTTCAATGGACAAATGGAACGGTCCCCAAGAAGGACCCACCACTGGCAGCATAATGGGGAGCTGGCTGAAGGGGGTGCTGAGCCCAAGGATCCATCCCCTTCTGGGCCCCATTCTGAGGACCTTAAGGTGCCCCCAGGGGTAGTCAGAAAGTCTCGTCGTGGCCGGAGGAGAAAATACAACCCCACCCGGAACAGCAACAGCTCCCGCCAAGACGTTACCTTGGACCCCAGCCCCACAACCCGCGCGGCTGTCCCTCTGCCTCCCCGGGCCCGCCCTGGCCGTCCTGCCAAAAACAAGAGGAGGAAACTGGCCCCATAG

Related Sequences

bmy_03880T0 Protein

Length: 1086 aa      View alignments
>bmy_03880T0
MNGGNESSGADRAGGPVATSVPIGWQRCVREGAVLYISPSGTELSSLEQTRSYLLSDGTCKCGLECPLNVPKVFNFDPLAPVTPGGAGVGPASEEDMTKLCNHRRKAVAMATLYRSMETTCSHSSPGESFHFTLETEENLRAWKRDGGRSFVRGKQGEGWSGELLGERRTQGSWEFMGEGMEKTKESSWKGSHRLILCFLFIAGEGASPQMFHTVSPGPPSARPPCRVPPTTPLNGAPGSLPPEPPSVPQAFPPLAGPGGLFPQPRLPDPVPSGGSSSPCFLPRGNAPSPAPPPPPAISLNAPSYSWGAALRSSLVPPDLGSSPAPHASSSPPSDPPLFHCSDALTPPPLPPSNNLPGPPGPPGPATQPPVSSATMHLPLVLGPLGGAPTVEGPRAPPFLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSSPRPSQRRPRRPPTVLRLLEGGGPQAPRRSRPRAPAPAPQPFPLPEPSQPILPSVLSLLGLPTPGPPNSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIPPSLPGTTSGSLSSVPGAPAPPAASKAPLVPSPVLQSPSEALGMGSGPACPLPPLAGGEAFPFPSPEQGLALSGAGFPGMLGTLPLPLSLGQPPPSPLLSHSLFGVLAGGGGQPPPEPLLPPPGGPGPPLAPGEPEGPSLLVASLLPPPASDLLPPPSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGETFSGLGDLPPLLFPPLSAPPTLIALNSALLAASLDPPSGAPPQPCVLSAPQPGPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLSASLLGDLSSLTSSPGTLPSLLQPPGPLLSGQLGLQLLPVGGAPPPLSEASSPLACLLQSLQIPPEQPEAPCLPPESPTSALEPEPARPPLSALAPPHSSPDPPVPELLTGRGSGKRGRRGGGGLRGINGEARPGRGRKPGSRREPGRLALKWGARGGFNGQMERSPRRTHHWQHNGELAEGGAEPKDPSPSGPHSEDLKVPPGVVRKSRRGRRRKYNPTRNSNSSRQDVTLDPSPTTRAAVPLPPRARPGRPAKNKRRKLAP*