Part of scaffold_103 (Scaffold)

For more information consult the page for scaffold_103 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLPB ENSTTRG00000009974 (Bottlenosed dolphin)

Gene Details

ClpB caseinolytic peptidase B homolog (E. coli)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009464, Bottlenosed dolphin)

Protein Percentage 89.51%
cDNA percentage 91.39%
Ka/Ks Ratio 0.55031 (Ka = 0.0484, Ks = 0.0879)

CLPB ENSBTAG00000001280 (Cow)

Gene Details

Caseinolytic peptidase B protein homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001687, Cow)

Protein Percentage 92.23%
cDNA percentage 91.65%
Ka/Ks Ratio 0.18227 (Ka = 0.0483, Ks = 0.2648)

CLPB  (Minke Whale)

Gene Details

ClpB caseinolytic peptidase B homolog (E. coli)

External Links

Gene match (Identifier: BACU019645, Minke Whale)

Protein Percentage 93.79%
cDNA percentage 95.79%
Ka/Ks Ratio 0.80693 (Ka = 0.0418, Ks = 0.0519)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1704 bp    Location:1052263..907399   Strand:-
>bmy_03671
ATGGGCGTGTGGGCGCTGGCGACGGTGCTGGTGGTACACTGTTACAGCAAGAGCCCGTCCAACAAGGGTGATTATCGGGACAGTATGGATGCAGCCCTGATGGAAGCTGTTCGAGCCAACAATGTCCAAGAAGTTAGCAGGCTGTTGTCGGAAGGTGCTGATGTCAATGCAAGGCACAGACTTGGCTGGACAGCACTCATGGTGGCAGCCATCAACCGAAACGACAGTGAAACCCTTCTCCTGTTTGACATTTGGCATTGCTCTAGCAAGAAGCCTGCTCAACTGGCACATTACAGTATCTTCAACTCTTGTCAAGTCCTGGTCACCCGAGAGGATGACTTCAACAACCGGCTGAACAACCGTGCCAGCTTCAAGGGCTGCACAGCCCTGCACTATGCTGTCCTTGCCGACGACTACCGCACCGTCAAGGAGCTGCTTGATGGAGGAGCTAATCCCCTGCAGAGGAATGAAATGGGACACACACCCTTGGATTATGCTCGAGAAGGGGAGGTGATGAAGCTTTTAAGGACTTCTGAGGCCAAGTACCAAGAGAAGCAGTGGAAACGTGAGGCCGAGGAACGGCGCCGCTTTCCCCTGGAGCAGCGGCTGAAGGAGCACATCATTGGCCAGGAGAGTGCCATCGCCACAGTAGGTGCTGTGATAATTATCCTGCCTTTTGTGTCATTGATTTATCTGCCTCCCTCCCTGTCCTCCCTTCTTATGTGTTTGGCCATAGCGATCCGGAGGAAGGAGAATGGCTGGTACGACGAAGAACACCCTCTGGTCTTCCTCTTCCTGGGATCATCTGGAATAGGAAAAACAGAACTGGCCAAGCAGACAGCCAAATATATGCACAAAGATGCCAAAAAGGGTTTCATCAGGCTAGACATGTCTGAGTTCCAGGAGCGGCATGAGGTGGCCAAGTTTATTGGGTCCCCACCAGGCTACATTGGCCATGAAGAGGGTGGCCAGCTGACCAAGAAGCTGAAGCAGTGCCCCAACGCTGTGGTGCTCTTCGATGAGGTGGACAAAGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGTGCAAGTCAGCTTGGGCCGGGATGGAGTTGGGGACACCTTCACGGTTCCTTCCCAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATCGACTGCAAGGACGCCATCTTCATCATGACCTCCAATGTGGGCAGTGACGAGATAGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCATAACCGGATCGCCGAGAACCTTGGGGATGTCCAGACTAGTGACAAGATCACCATCTCTAAGAACTTCAAGGAAAATGTGATTCGCCCCATCCTAAAAGCTCACTTCAGGAGAGATGAGTTTCTGGGACGAATCAATGAGATCGTCTACTTCCTCCCCTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAGCTGAATTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACACTGCTCTGGGACCGTGAGGTGGCGGACGTGTTGGTCGACGGCTACAACGTGCACTATGGCGCCCGCTCCATTAAGCATGAGGCTGAGAAGCGTCCACCCAAGCTGCGCCTGGAGATCATCGATAAGGACAGCAAGACCCACAGATTGGACATCCAGGCACCACTAAACCCTGAGAAGGTGTGCCACACCCTCTAG

Related Sequences

bmy_03671T0 Protein

Length: 568 aa      View alignments
>bmy_03671T0
MGVWALATVLVVHCYSKSPSNKGDYRDSMDAALMEAVRANNVQEVSRLLSEGADVNARHRLGWTALMVAAINRNDSETLLLFDIWHCSSKKPAQLAHYSIFNSCQVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQWKREAEERRRFPLEQRLKEHIIGQESAIATVGAVIIILPFVSLIYLPPSLSSLLMCLAIAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEVQVSLGRDGVGDTFTVPSQGRLTDGKGKTIDCKDAIFIMTSNVGSDEIAQHALQLRQEALEMSHNRIAENLGDVQTSDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEAEKRPPKLRLEIIDKDSKTHRLDIQAPLNPEKVCHTL*