Part of scaffold_103 (Scaffold)

For more information consult the page for scaffold_103 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHRNA10 ENSTTRG00000016639 (Bottlenosed dolphin)

Gene Details

cholinergic receptor, nicotinic, alpha 10 (neuronal)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015774, Bottlenosed dolphin)

Protein Percentage 74.83%
cDNA percentage 75.14%
Ka/Ks Ratio 0.15035 (Ka = 0.0104, Ks = 0.0689)

CHRNA10 ENSBTAG00000044059 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053843, Cow)

Protein Percentage 95.79%
cDNA percentage 94.16%
Ka/Ks Ratio 0.07145 (Ka = 0.0185, Ks = 0.2586)

CHRNA10  (Minke Whale)

Gene Details

cholinergic receptor, nicotinic, alpha 10 (neuronal)

External Links

Gene match (Identifier: BACU004956, Minke Whale)

Protein Percentage 98.86%
cDNA percentage 99.14%
Ka/Ks Ratio 0.2277 (Ka = 0.005, Ks = 0.0219)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1287 bp    Location:535157..538343   Strand:+
>bmy_03653
TGCTTCGGAGCCGAGGGCAGGCTGGCACACAAGCTGTTCCGAGACCTCTTTGCCAACTACACAAGTGCCCTGAGACCTGTGGCAGACACAGACCAGGCTCTGAACGTGACCCTGGAAGTGACGTTGTCCCAGATCATCGACATGGATGAGCGGAACCAGGTGCTGACCCTGTACCTGTGGATCCGACAGGAGTGGACAGATGCCTACCTACGATGGGACCCTGACGCCTATGGTGGCCTGGATGCCATCCGCATCCCCAGCAGTCTCGTGTGGCGGCCGGACATCATACTCTATAACAAGGCGGACGCGCAGGCGCCAGCCTCAGCCAGCACCAACGTGGTCCTGCGGCACGACGGCGCCGTGCGTTGGGACGCGCCGGCCATCACGCGCAGCTCGTGCCGCGTGGATGTGTCGGCCTTCCCATTCGACGCGCAGCGCTGCGGCCTGACGTTCGGCTCGTGGACGCACAGCGGGCACCAGCTGGACGTACAGCCGCGCGGCGCCGCCGCCAGCCTGGCCGACTTTGTGGAGAACGTGGAGTGGCGCGTGCTGGGCATGCCGGCCCGGCGGCGCGTGCTCACCTACGGCTGCTGCTCCGAGCCCTACCCGGACGTGACCTTCACGCTGCTGCTGCGCCGCCGCGCCGCCGCCTACGTGTGCAACCTGCTGCTGCCCTGCGTGCTCATCTCGCTGCTGGCGCCTCTGGCCTTCCACCTGCCCGCCGACTCGGGCGAGAAGGTGTCGCTCGGCGTCACCGTGCTGCTGGCGCTCACCGTCTTCCAGCTGCTCCTGGCCGAGAGCATGCCGCCGGCCGAGAGCGTGCCGCTCATCGGAAAGTACTACATGGCCACCATGACCATGGTCACCTTCTCCACAGCGCTCACCATCCTTATCATGAACCTGCATTATTGTGGTCCCAGTGCCCGCCCAGTGCCAGCCTGGGCTCGGGCCCTCCTGCTGGGACGCCTGGCGCGGGGCCTGTGTGTGCGGCAACGAGGGGAGTCCTGTGGGCAGTCTAGATCTCCTGAGTCATCCCCCAGCCCCCAGCCTCCTGACAGAGAAGCTGGCCCACCAGCAGGCCCTTGCCGTGAGCCTCGGTGTCTGTGCCATCAGGAAGCCCTGCTACGCCATGTAGCCACCATCACCAACACCTTCCACAGACACAGGGCTGCCCAGCGCTGCCATGAGGACTGGAAGCGCCTGGCCCGTGTCATGGACCGTTTCTTCCTGGGCATTTTCTTCTCCATGGCCCTGGTGATGAGCCTTCTCGTGCTGGTGCAGGCCCTG

Related Sequences

bmy_03653T0 Protein

Length: 429 aa      View alignments
>bmy_03653T0
CFGAEGRLAHKLFRDLFANYTSALRPVADTDQALNVTLEVTLSQIIDMDERNQVLTLYLWIRQEWTDAYLRWDPDAYGGLDAIRIPSSLVWRPDIILYNKADAQAPASASTNVVLRHDGAVRWDAPAITRSSCRVDVSAFPFDAQRCGLTFGSWTHSGHQLDVQPRGAAASLADFVENVEWRVLGMPARRRVLTYGCCSEPYPDVTFTLLLRRRAAAYVCNLLLPCVLISLLAPLAFHLPADSGEKVSLGVTVLLALTVFQLLLAESMPPAESVPLIGKYYMATMTMVTFSTALTILIMNLHYCGPSARPVPAWARALLLGRLARGLCVRQRGESCGQSRSPESSPSPQPPDREAGPPAGPCREPRCLCHQEALLRHVATITNTFHRHRAAQRCHEDWKRLARVMDRFFLGIFFSMALVMSLLVLVQAL