Sequence details bmy_03446 (Coding sequence)

Part of scaffold_97 (Scaffold)

For more information consult the page for scaffold_97 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

QTRTD1 ENSTTRG00000000180 (Bottlenosed dolphin)

Gene Details

queuine tRNA-ribosyltransferase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000167, Bottlenosed dolphin)

Protein Percentage 97.42%
cDNA percentage 97.74%
Ka/Ks Ratio 0.1908 (Ka = 0.0105, Ks = 0.0548)

QTRTD1 ENSBTAG00000004977 (Cow)

Gene Details

queuine tRNA-ribosyltransferase subunit QTRTD1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000048481, Cow)

Protein Percentage 95.02%
cDNA percentage 94.57%
Ka/Ks Ratio 0.17406 (Ka = 0.0243, Ks = 0.1397)

QTRTD1  (Minke Whale)

Gene Details

queuine tRNA-ribosyltransferase domain containing 1

External Links

Gene match (Identifier: BACU009321, Minke Whale)

Protein Percentage 98.67%
cDNA percentage 99.29%
Ka/Ks Ratio 0.69957 (Ka = 0.0039, Ks = 0.0056)

Additional orthologs identified in other species via the OPTIC pipeline.

QTRTD1 (Human)   Qtrtd1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1194 bp    Location:160390..177891   Strand:+
Raw sequence 
>bmy_03446
ATGGAACTCCTTCTGAATGTAATGTACTTTTCTTATCAGGACCTAGAGGAACCCCTTAGGATGAAGCTAAGTCTTACYAAGGTGGTTAATGGCTGTCGCCTAGGAAAAATAAAAAACCTAGGCAAAACAGGGGACTGCACCATGGACATTCCAGGCTGCCTTCTGTACACCAAGACTGGCTCTGCCCCACACCTGACCCATCACACGCTGCATAAAATCCACGGGGTTCCTGCCATGGCTCAGCTTACACTGTCATCACTGGCAGAACATCATGAAGTCTTGGCAGAATATAAGGAAGGAGTTGGAAAGTTTATAGGCATGCCAGAATCACTCTTGTACTGCTCCCTGCATGATCCAGTCAGCCCTTGCCCAGCTGGTTATGTAACAAATAAGTCAGTGTCTGTGTGGGGTRTTGGAGGACGAGTGGAAATGACTGCCTCCAAGTTCATGGCAATTCAGCAGGCCCTTCAGCCAGACTGGTTCCAGTGCCTTTCAGATGGAGAGGCAACTTGTGATGAAACCACTTCCATAAAAAGAGCCAGAAATATGATCATTGGAGTGATTGAAGGTGGAGATGTGATGGAGGAGAGGCTGAGGTCAGCACGAGAGACAGCCAAGCGGCCTGTAGGTGGCTTCCTTCTGGATGGCTTTCAAGGGACTCCAACAACCCTGGAGACTAGACTGCACTTGCTGCTCATCTGCGGTGTTAGCCAGCCAGATGAGGTGCTCGAGTGTATTGAAAGAGGAGTGGACTTATTTGAGAGTTTTTTCCCTTATCAAGCAACAGAGCGGGGATGTGCCCTGACCTTCAGCTTTGATTACCAGCCGAATCCTGAAGAGACATTATTGCAACAAAATGGGACACAGGAAGAAGTAAAATATGTGGATCAAACAAAGAAAAGTAAAACAACCAGTTGCAACCAAGAAATGACATCATTTGAAATTAATCTGAAGGAAAAAAAGTACCAGGAGGACTTTGATCCGCTCGTGAGGGGGTGTCCCTGTTACTGCTGTAAGAATCACACTCGTGCGTACATCCACCATCTGCTGGTGACCAACGAGCTGTTGGCTGGCGTCCTGCTTATGATGCACAACTTTGAACACTACTTTGGATTTTTCCAGGCCATCCGGGAAGCACTAAAAAGTGACCGACTGGCACAGTTGAAAGAGCTCATCCACAGGCAAGCATCTTGA

Related Sequences

bmy_03446T0 Protein

Length: 398 aa      View alignments
>bmy_03446T0
MELLLNVMYFSYQDLEEPLRMKLSLTKVVNGCRLGKIKNLGKTGDCTMDIPGCLLYTKTGSAPHLTHHTLHKIHGVPAMAQLTLSSLAEHHEVLAEYKEGVGKFIGMPESLLYCSLHDPVSPCPAGYVTNKSVSVWGXGGRVEMTASKFMAIQQALQPDWFQCLSDGEATCDETTSIKRARNMIIGVIEGGDVMEERLRSARETAKRPVGGFLLDGFQGTPTTLETRLHLLLICGVSQPDEVLECIERGVDLFESFFPYQATERGCALTFSFDYQPNPEETLLQQNGTQEEVKYVDQTKKSKTTSCNQEMTSFEINLKEKKYQEDFDPLVRGCPCYCCKNHTRAYIHHLLVTNELLAGVLLMMHNFEHYFGFFQAIREALKSDRLAQLKELIHRQAS*