Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCT3 ENSTTRG00000001407 (Bottlenosed dolphin)

Gene Details

chaperonin containing TCP1, subunit 3 (gamma)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001324, Bottlenosed dolphin)

Protein Percentage 99.08%
cDNA percentage 98.35%
Ka/Ks Ratio 0.09073 (Ka = 0.0044, Ks = 0.0481)

BT.28845 ENSBTAG00000006370 (Cow)

Gene Details

T-complex protein 1 subunit gamma

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008358, Cow)

Protein Percentage 98.17%
cDNA percentage 94.92%
Ka/Ks Ratio 0.04884 (Ka = 0.0087, Ks = 0.1791)

CCT3  (Minke Whale)

Gene Details

chaperonin containing TCP1, subunit 3 (gamma)

External Links

Gene match (Identifier: BACU003941, Minke Whale)

Protein Percentage 99.63%
cDNA percentage 99.33%
Ka/Ks Ratio 0.11507 (Ka = 0.0018, Ks = 0.0158)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1638 bp    Location:1206934..1191991   Strand:-
>bmy_03413
ATGATGGGCCATCGTCCGGTACTCGTGCTTAGCCAGAACACAAAGCGTGAATCTGGAAGAAAAGTTCAATCTGGAAACATCAATGCTGCCAAGACTATTGCAGATGTCATCCGAACATGTTTGGGACCCAAGTCTATGATGAAGATGCTTTTGGACCCAATGGGAGGCATTGTGATGACCAATGATGGCAATGCTATCCTTCGAGAGATTCAAGTACAGCATCCAGCAGCCAAGTCCATGATTGAAATTAGCCGGACACAGGATGAAGAGGTTGGAGATGGSACCACATCTGTAATTATTCTTGCAGGGGAGATGCTGTCTGTGGCTGAGCACTTCCTAGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCAGGGCTCTGGACGATATGATCAGCACCCTTAAGAAAATAAGTACCCCTGTTGACACCAGTAACCGAGATGCCATGCTGAACATCATCAACAGCTCCATTACCACCAAAGTAATCAGTCGGTGGTCTTCTTTGGCTTGCAACATTGCCCTGGATGCTGTCAAAACTGTACAGTTTGAGGAGAACGGTCGGAAGGAGATTGACATCAAGAAATACGCAAAAGTAGAAAAGATACCTGGCGGCATCATTGAAGACTCGTGTGTGTTACGTGGAGTCATGATTAACAAGGATGTGACCCATCCGCGGATGCGGCGCTATATCAAGAACCCTCGCATCGTGCTGCTGGATTCTTCTCTGGAATACAAGAAAGGAGAAAGCCAGACTGACATTGAGATCACACGAGAGGAAGACTTCACCCGAATCCTCCAAATGGAAGAAGAGTACATTCAGCAGCTCTGTGAGGACATTATCCATCTGAAGCCAGACGTGGTCATCACAGAAAAGGGCATCTCAGATTTAGCTCAGCACTACCTCATGCGGGCCAATATCACAGCCATCCGCAGAGTCCGGAAGACAGACAATAATCGCATTGCTAGAGCCTGTGGGGGCCGGATAGCCAGCCGACCAGAGGAACTGAGAGAAGAAGATGTTGGGACAGGGGCAGGCCTGTTGGAAATCAAGAAAATTGGAGATGAGTACTTTACATTCATCACTGAGTGCAGAGACCCCAAGGCCTGCACCATTCTCCTCCGGGGGGCCAGCAAAGAGATTCTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAGGTGTGCCGCAATGTTCTCCTGGACCCTCAGCTGGTGCCTGGGGGTGGGGCTTCTGAGATGGCTGTGGCTCATGCCTTGACAGAAAAATCCAAGGCCATGACTGGTGTGGAACAATGGCCATATCGGGCTGTTGCCCAAGCCCTAGAGGTCATCCCTCGTACCCTTATTCAAAACTGTGGGGCCAGCACCATCCGTCTACTTACCTCCCTTCGGGCCAAGCACACTCAGGAGAATTGTGAGACCTGGGGCGTAAATGGTGAGACAGGTACTTTGGTGGACATGAAAGAACTGGGCATCTGGGAACCATTGGCTGTAAAGCTGCAAACGTATAAGACAGCAGTGGAGACGGCAGTTCTACTGCTGCGGATTGATGACATCGTATCAGGCCACAAAAAAAAGGGTGATGACCAGAGCCAGCAAGGAGGGGCTCCTGATGCTGGCCAGGAGTGA

Related Sequences

bmy_03413T0 Protein

Length: 546 aa      View alignments
>bmy_03413T0
MMGHRPVLVLSQNTKRESGRKVQSGNINAAKTIADVIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRRALDDMISTLKKISTPVDTSNRDAMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYAKVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIHLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGGRIASRPEELREEDVGTGAGLLEIKKIGDEYFTFITECRDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSQQGGAPDAGQE*